RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 SERPINE3A8MV23 424 aa10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 S100A8P05109 93 aa10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 CEACAM6P40199 344 aa10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 ELLP55199 621 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 SSTP61278 116 aa10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 GGNQ86UU5 652 aa10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 PAQR4Q8N4S7 273 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 LRRC29Q8WV35 223 aa10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 EDARADDQ8WWZ3 215 aa10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 MRPL24Q96A35 216 aaKnown RBP10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 LOXL4Q96JB6 756 aa10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 SLC25A32Q9H2D1 315 aa10.55□□□□□ -0.72
ARHGEF40-206ENST00000555232 RFPL4AA6NLU0 287 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 RFPL4AL1F8VTS6 287 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 SNAPINO95295 136 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 ZNF17P17021 662 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 MECP2P51608 486 aaKnown RBP10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 NCMAPQ5T1S8 102 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 SSX3Q99909 188 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 PROK2Q9HC23 129 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 DCAF16Q9NXF7 216 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 TPT1P13693 172 aaKnown RBP10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 LHX2P50458 406 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 OR2W3Q7Z3T1 314 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 MOGAT3Q86VF5 341 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 PRR7Q8TB68 274 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 LEAP2Q969E1 77 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 PRO3102Q9H379 93 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 SPRR3Q9UBC9 169 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 SH2D1BO14796 132 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 GFRA3O60609 400 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 LILRA1O75019 489 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 IFNA5P01569 189 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 WT1P19544 449 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 HGFACQ04756 655 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 ADAMTS17Q8TE56 1095 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 FBXO7Q9Y3I1 522 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 NPTNQ9Y639 398 aa10.54□□□□□ -0.72
ARHGEF40-206ENST00000555232 ZNF716A6NP11 495 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 CYTIPO60759 359 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 IFI6P09912 130 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 SRSF3P84103 164 aaKnown RBP10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 ETV3LQ6ZN32 361 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 TMEM123Q8N131 208 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 ZNF709Q8N972 641 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 OR6K3Q8NGY3 331 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 NPDC1Q9NQX5 325 aaPredicted RBP10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 ZNF106Q9H2Y7 1883 aaKnown RBP10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 SNRNP70P08621 437 aaKnown RBP10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 NKX2-1P43699 371 aaPredicted RBP10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 CLDN18P56856 261 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 ACTBL2Q562R1 376 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 RPRMLQ8N4K4 120 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 KCNRGQ8N5I3 272 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 CNTNAP3BQ96NU0 1288 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 PIGMQ9H3S5 423 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 RPS10P5Q9NQ39 176 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 SEMA5BQ9P283 1151 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 PSG11Q9UQ72 335 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 USP9XQ93008 2570 aaPredicted RBP10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 IGKV1D-8A0A087WSZ0 117 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 F8VVB4 439 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 F8VWA3 439 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 APELAP0DMC3 54 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 LGI3Q8N145 548 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 OR13G1Q8NGZ3 307 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 OIT3Q8WWZ8 545 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 ISOC2Q96AB3 205 aa10.53□□□□□ -0.72
ARHGEF40-206ENST00000555232 SNRPGP15A8MWD9 76 aa10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 H0YL77 283 aa10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 ACTL6AO96019 429 aa10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 TNFSF4P23510 183 aa10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 MPPED2Q15777 294 aa10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 ZNF674Q2M3X9 581 aa10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 FAM185AQ8N0U4 392 aa10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 GAPTQ8N292 157 aa10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 OR1K1Q8NGR3 316 aa10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 RBM14Q96PK6 669 aaKnown RBP10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 POLDIP2Q9Y2S7 368 aa10.52□□□□□ -0.72
ARHGEF40-206ENST00000555232 A0A0U1RQK1 487 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 ATXN7O15265 892 aaPredicted RBP10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 GSTZ1O43708 216 aaPredicted RBP10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 RAG2P55895 527 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 GGNBP1Q5YKI7 109 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 TMEM182Q6ZP80 229 aaPredicted RBP10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 C9orf106Q8NAJ2 232 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 UNKLQ9H9P5 680 aaKnown RBP10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 TAAR3PQ9P1P4 343 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 NBEAQ8NFP9 2946 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 FAM24AA6NFZ4 105 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 HEXAP06865 529 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 RPL12P30050 165 aaKnown RBP10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 RBPJQ06330 500 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 FOXO1Q12778 655 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 YLPM1P49750 1951 aaKnown RBP10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 ISG15P05161 165 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 SNRPCP09234 159 aaKnown RBP10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 ALDH3B1P43353 468 aa10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 UBA52P62987 128 aaKnown RBP10.52□□□□□ -0.73
ARHGEF40-206ENST00000555232 NSUN5P2Q63ZY6 315 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms