RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 IL11RAQ14626 422 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF429Q86V71 674 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 THNSL2Q86YJ6 484 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 SELENOHQ8IZQ5 122 aaKnown RBP8.19□□□□□ -1.1
SYNE2-213ENST00000554805 FAM185AQ8N0U4 392 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 M1APQ8TC57 530 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 EGLN1Q9GZT9 426 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 CALHM2Q9HA72 323 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 GSN-AS1Q9NRJ2 163 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 LY6G6EA0A0G2JKS1 128 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF732B4DXR9 585 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 RPL36A-HNRNPH2H7BZ11 118 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 S100A2P29034 98 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 RPS23P62266 143 aaKnown RBP8.19□□□□□ -1.1
SYNE2-213ENST00000554805 ARF1P84077 181 aaKnown RBP8.19□□□□□ -1.1
SYNE2-213ENST00000554805 PRDX4Q13162 271 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 TCEAL6Q6IPX3 200 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF818PQ6ZRF7 136 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 STX12Q86Y82 276 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF100Q8IYN0 542 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 OR2Y1Q8NGV0 311 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 RAB39BQ96DA2 213 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 SGCZQ96LD1 299 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 TUBA4BQ9H853 241 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 IL36RNQ9UBH0 155 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 METTL1Q9UBP6 276 aaKnown RBP8.19□□□□□ -1.1
SYNE2-213ENST00000554805 WSB1Q9Y6I7 421 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 U3KQA8 63 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 COL5A1P20908 1838 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-213ENST00000554805 LOC102723996A0A087X1L8 192 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 CLN5O75503 358 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 SLC34A2O95436 690 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 CNOT4O95628 575 aaKnown RBP8.18□□□□□ -1.1
SYNE2-213ENST00000554805 FGF5P12034 268 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 HNF4GQ14541 408 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 IZUMO4Q1ZYL8 232 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF343Q6P1L6 599 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 SLC23A3Q6PIS1 610 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 LILRB2Q8N423 598 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 SCGB1C1Q8TD33 95 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 KCNE4Q8WWG9 221 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 HPSE2Q8WWQ2 592 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 NIPSNAP3BQ9BS92 247 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 GNG13Q9P2W3 67 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF391Q9UJN7 358 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 TRBV23-1A0A0A0MS06 115 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 IGKV1D-13A0A0B4J2D9 117 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 ZFP92A6NM28 416 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 PITX3O75364 302 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 IGKV1-13P0DP09 117 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 EDN3P14138 238 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 TMEM267Q0VDI3 215 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-213ENST00000554805 OR8B8Q15620 311 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 PDZD11Q5EBL8 140 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 CYB561D1Q8N8Q1 229 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 UBALD1Q8TB05 177 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 TMEM171Q8WVE6 324 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 GNPNAT1Q96EK6 184 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF488Q96MN9 340 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 TAAR9Q96RI9 348 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 GLRX2Q9NS18 164 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 DCHS1Q96JQ0 3298 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 TECTAO75443 2155 aa8.18□□□□□ -1.1
SYNE2-213ENST00000554805 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 ATXN7O15265 892 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-213ENST00000554805 KLF7O75840 302 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-213ENST00000554805 OR8U8P0C7N1 319 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 S100PP25815 95 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 RAB11AP62491 216 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 DLK1P80370 383 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 TLE4Q04727 773 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 DNLZQ5SXM8 178 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 LCN15Q6UWW0 184 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 HS3ST6Q96QI5 342 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 SCRT1Q9BWW7 348 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 TRAV39A0A0B4J263 110 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 KIR2DS1A0A191URI9 304 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF716A6NP11 495 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 PROB1E7EW31 1015 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 TERTO14746 1132 aaKnown RBP8.17□□□□□ -1.1
SYNE2-213ENST00000554805 IAPPP10997 89 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 KIR2DS4P43632 304 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 STARD6P59095 220 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 KIR2DS1Q14954 304 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 TMEM42Q69YG0 159 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 ASCL4Q6XD76 172 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 CPEB3Q8NE35 698 aaKnown RBP8.17□□□□□ -1.1
SYNE2-213ENST00000554805 PSMF1Q92530 271 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 LYRM2Q9NU23 88 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-213ENST00000554805 KCNS2Q9ULS6 477 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF407Q9C0G0 2248 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 SLC22A20A6NK97 555 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 VDAC1P21796 283 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 FAM209BQ5JX69 171 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 Q6ZSR3 168 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 ZDHHC23Q8IYP9 409 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 TOLLIPQ9H0E2 274 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 TMPRSS5Q9H3S3 457 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 Q9N2K0 584 aa8.17□□□□□ -1.1
SYNE2-213ENST00000554805 K7ESF4 209 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms