RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 MST1LQ2TV78 715 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 NRN1LQ496H8 165 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 SLC22A6Q4U2R8 563 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 WIPI1Q5MNZ9 446 aaPredicted RBP9.55□□□□□ -0.88
SRP54-205ENST00000554803 FAM27BQ5VT28 67 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 YRDCQ86U90 279 aaKnown RBP9.55□□□□□ -0.88
SRP54-205ENST00000554803 TMEM251Q8N6I4 163 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 RNASE6Q93091 150 aaKnown RBP9.55□□□□□ -0.88
SRP54-205ENST00000554803 SARAFQ96BY9 339 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 SPIN2AQ99865 258 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 SPIN2BQ9BPZ2 258 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 EMC6Q9BV81 110 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 PLEKHJ1Q9NW61 149 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 MYEF2Q9P2K5 600 aaKnown RBP9.55□□□□□ -0.88
SRP54-205ENST00000554803 ANXA10Q9UJ72 324 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 STARD10Q9Y365 291 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 TMED3Q9Y3Q3 217 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 ROS1P08922 2347 aa9.55□□□□□ -0.88
SRP54-205ENST00000554803 RAI1Q7Z5J4 1906 aaPredicted RBP9.54□□□□□ -0.88
SRP54-205ENST00000554803 USF3Q68DE3 2245 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 IGKV1-9A0A0C4DH69 117 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 A0A1W2PPR1 153 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 ZNF98A6NK75 572 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 UMAD1C9J7I0 102 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 M0R135 149 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 HAX1O00165 279 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 AQP7O14520 342 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 NUPL2O15504 423 aaKnown RBP9.54□□□□□ -0.88
SRP54-205ENST00000554803 DHHO43323 396 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 SMPD2O60906 423 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 WDR1O75083 606 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 RAD51DO75771 328 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 TRAPPC6AO75865 159 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 CST2P09228 141 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 SMIM6P0DI80 62 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 MMP9P14780 707 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 ZNF708P17019 499 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 ADCYAP1P18509 176 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 DUSP1P28562 367 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 FBXL19-AS1Q494R0 122 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 RIPPLY2Q5TAB7 128 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 RAET1LQ5VY80 246 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 Q6ZS49 121 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 LGI3Q8N145 548 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 SEMA6DQ8NFY4 1073 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 OR14L1PQ8NHC6 308 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 ZNF799Q96GE5 643 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 KIRREL1Q96J84 757 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 SULT4A1Q9BR01 284 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 GINS3Q9BRX5 216 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 ST6GALNAC5Q9BVH7 336 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 TLNRD1Q9H1K6 362 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 DEFB127Q9H1M4 99 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 HIPK2Q9H2X6 1198 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 NAA60Q9H7X0 242 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 OR5AC2Q9NZP5 309 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 FOXD3Q9UJU5 478 aaPredicted RBP9.54□□□□□ -0.88
SRP54-205ENST00000554803 TIMM10BQ9Y5J6 103 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 LIPGQ9Y5X9 500 aa9.54□□□□□ -0.88
SRP54-205ENST00000554803 C1orf196B1AJZ1 125 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 RER1O15258 196 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 ADAP1O75689 374 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 CDS2O95674 445 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 TSPAN15O95858 294 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 SFTA3P0C7M3 94 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 DANCRP0C864 163 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 FCGR2AP12318 317 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 MUC1P15941 1255 aaPredicted RBP9.53□□□□□ -0.88
SRP54-205ENST00000554803 FCGR2CP31995 323 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 GLP1RP43220 463 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 S100A10P60903 97 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 KRTAP1-1Q07627 177 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 PDZK1IP1Q13113 114 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 ENDOGQ14249 297 aaKnown RBP9.53□□□□□ -0.88
SRP54-205ENST00000554803 ZNF266Q14584 549 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 ABCA11PQ4W5N1 156 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 C1orf185Q5T7R7 199 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 TMEM42Q69YG0 159 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 TMEM123Q8N131 208 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 GPR137CQ8N3F9 429 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 ZNF561Q8N587 486 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 MALSU1Q96EH3 234 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 OR10C1Q96KK4 312 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 BANF2Q9H503 90 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 IFT22Q9H7X7 185 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 BCO1Q9HAY6 547 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 ZNF286AQ9HBT8 521 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 ACKR4Q9NPB9 350 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 PKD1L1Q8TDX9 2849 aa9.53□□□□□ -0.88
SRP54-205ENST00000554803 SVEP1Q4LDE5 3571 aa9.52□□□□□ -0.89
SRP54-205ENST00000554803 MSGN1A6NI15 193 aa9.52□□□□□ -0.89
SRP54-205ENST00000554803 LINC01387J3KSC0 135 aa9.52□□□□□ -0.89
SRP54-205ENST00000554803 ST8SIA3O43173 380 aa9.52□□□□□ -0.89
SRP54-205ENST00000554803 S100A9P06702 114 aaKnown RBP9.52□□□□□ -0.89
SRP54-205ENST00000554803 SFTPBP07988 381 aa9.52□□□□□ -0.89
SRP54-205ENST00000554803 ZNF728P0DKX0 622 aa9.52□□□□□ -0.89
SRP54-205ENST00000554803 OR5H8P0DN80 308 aa9.52□□□□□ -0.89
SRP54-205ENST00000554803 GLRA1P23415 457 aa9.52□□□□□ -0.89
SRP54-205ENST00000554803 PTAFRP25105 342 aa9.52□□□□□ -0.89
SRP54-205ENST00000554803 SFTPDP35247 375 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms