RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 OR10AC1Q8NH08 325 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 RPS4Y2Q8TD47 263 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 NPRL2Q8WTW4 380 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 SSMEM1Q8WWF3 244 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 H1FXQ92522 213 aaKnown RBP3.36□□□□□ -1.87
VTI1B-203ENST00000554636 SLAMF9Q96A28 289 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 PELI1Q96FA3 418 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 C4orf36Q96KX1 117 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 C9orf16Q9BUW7 83 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 TNFRSF19Q9NS68 423 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 C19orf12Q9NSK7 152 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 MTCH1Q9NZJ7 389 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 C1RLQ9NZP8 487 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 ZNRD1Q9P1U0 126 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 IL36RNQ9UBH0 155 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 GNG8Q9UK08 70 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 POLDIP2Q9Y2S7 368 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 ORC6Q9Y5N6 252 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 GMPPBQ9Y5P6 360 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 MMP24Q9Y5R2 645 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 POMT1Q9Y6A1 747 aa3.36□□□□□ -1.87
VTI1B-203ENST00000554636 KIAA2026Q5HYC2 2103 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 IGKV1-12A0A0C4DH73 117 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 TRBV2A0A0J9YWF9 115 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 LOC100130705A0A1B0GUX0 176 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 FAM230AA0A1W2PPH8 454 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 A0A1W2PQ09 198 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 A0A1W2PRD5 423 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 A0A1W2PRF3 423 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 A0A1W2PRM7 423 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 C17orf98A8MV24 154 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 E9PI62 339 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 J3QLW9 94 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 K7N7A8 449 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 EBAG9O00559 213 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 GPR137BO60478 399 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 WBP4O75554 376 aaKnown RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 HAND1O96004 215 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 IL1AP01583 271 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 IGKV1D-12P01611 117 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 MT-ND2P03891 347 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 TK1P04183 234 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ISG15P05161 165 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 HTR1AP08908 422 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 FBP1P09467 338 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 CCL3L1P16619 93 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF19P17023 458 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 BCL3P20749 454 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 AZGP1P25311 298 aaKnown RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 SAA4P35542 130 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ATP6V1E1P36543 226 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 IER3P46695 156 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 NPBWR2P48146 333 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 POU3F4P49335 361 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 CCR9P51686 369 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 BMXP51813 675 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 UBE2E1P51965 193 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 FUT6P51993 359 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 CAPZA1P52907 286 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 KRTAP10-3P60369 221 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ACTA2P62736 377 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ACTG2P63267 376 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ACSM1Q08AH1 577 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ZSCAN26Q16670 478 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 TMEM244Q5VVB8 128 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 OLFML2AQ68BL7 652 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ASPHD2Q6ICH7 369 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ZBTB49Q6ZSB9 765 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 C1orf122Q6ZSJ8 110 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 SLC25A26Q70HW3 274 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 MKXQ8IYA7 352 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 SYS1Q8N2H4 156 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ACBD7Q8N6N7 88 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 DNAAF1Q8NEP3 725 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 OR4M1Q8NGD0 313 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 OR52I1Q8NGK6 324 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 OR4F5Q8NH21 305 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 SGMS2Q8NHU3 365 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 RHOXF1Q8NHV9 184 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 C17orf50Q8WW18 174 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 PP6455Q8WZ26 134 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 RGP1Q92546 391 aaPredicted RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 EMG1Q92979 244 aaKnown RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 BORCS8Q96FH0 119 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 CEP19Q96LK0 163 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 RDH12Q96NR8 316 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 OPALINQ96PE5 141 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 SLITRK2Q9H156 845 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 METTL8Q9H825 291 aaKnown RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ISG20L2Q9H9L3 353 aaKnown RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 PLEKHA1Q9HB21 404 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 SEBOXQ9HB31 216 aaPredicted RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 FGF20Q9NP95 211 aaPredicted RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 INPP5EQ9NRR6 644 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 RBFOX1Q9NWB1 397 aaKnown RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 FAM118AQ9NWS6 357 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.35□□□□□ -1.87
VTI1B-203ENST00000554636 OR14J1Q9UGF5 321 aa3.35□□□□□ -1.87
VTI1B-203ENST00000554636 VPREB3Q9UKI3 123 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms