RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 MPIG6BO95866 241 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 RENP00797 406 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 CD99P14209 185 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 MSR1P21757 451 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 OR1D2P34982 312 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 SLC6A8P48029 635 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 PSEN2P49810 448 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 MRPS6P82932 125 aaKnown RBP8.25□□□□□ -1.09
SIX4-202ENST00000554079 POU3F1Q03052 451 aaPredicted RBP8.25□□□□□ -1.09
SIX4-202ENST00000554079 ARFRP1Q13795 201 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 CTXN3Q4LDR2 81 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 EMC4Q5J8M3 183 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 CDCP2Q5VXM1 449 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 C1orf122Q6ZSJ8 110 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 KCNG3Q8TAE7 436 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 LRRC3BQ96PB8 259 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 RSG1Q9BU20 258 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 SAMD10Q9BYL1 202 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 VSIRQ9H7M9 311 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 FOXI3A8MTJ6 420 aaPredicted RBP8.25□□□□□ -1.09
SIX4-202ENST00000554079 IFNA1P01562 189 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 GPX1P07203 203 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 PIGPP57054 158 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 NTHL1P78549 312 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 MRPS34P82930 218 aaKnown RBP8.25□□□□□ -1.09
SIX4-202ENST00000554079 Q0VG73 95 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 ZNF74Q16587 644 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 ALG10Q5BKT4 473 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 RNF44Q7L0R7 432 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 ZNF440Q8IYI8 595 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 OR1N2Q8NGR9 330 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 OR11L1Q8NGX0 322 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 ATP5SQ99766 215 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 CFHR5Q9BXR6 569 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 UBE2ZQ9H832 354 aaPredicted RBP8.25□□□□□ -1.09
SIX4-202ENST00000554079 C19orf53Q9UNZ5 99 aaPredicted RBP8.25□□□□□ -1.09
SIX4-202ENST00000554079 EMC9Q9Y3B6 208 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 LINC01553A4QN01 128 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 TMEM250H0YL14 139 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 P2RY10O00398 339 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 MLNRO43193 412 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 ZNF253O75346 499 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 HLA-HP01893 362 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 IGLC1P0CG04 106 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 CRISP2P16562 243 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 OTX1P32242 354 aaPredicted RBP8.24□□□□□ -1.09
SIX4-202ENST00000554079 CD70P32970 193 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 MEF2BQ02080 365 aaPredicted RBP8.24□□□□□ -1.09
SIX4-202ENST00000554079 BAXQ07812 192 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 FAM53BQ14153 422 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 SYT13Q7L8C5 426 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 CPEB2Q7Z5Q1 589 aaKnown RBP8.24□□□□□ -1.09
SIX4-202ENST00000554079 VASH2Q86V25 355 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 ZNF547Q8IVP9 402 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 SIGLECL1Q8N7X8 197 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 OR10W1Q8NGF6 305 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 DOK4Q8TEW6 326 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 DAZLQ92904 295 aaKnown RBP8.24□□□□□ -1.09
SIX4-202ENST00000554079 ADAT3Q96EY9 351 aaPredicted RBP8.24□□□□□ -1.09
SIX4-202ENST00000554079 FOXN4Q96NZ1 517 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 ATP6V0BQ99437 205 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 TM2D1Q9BX74 207 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 LIME1Q9H400 295 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 BANF2Q9H503 90 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 ZDHHC11Q9H8X9 412 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 FAM60AQ9NP50 221 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 CLEC1BQ9P126 229 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 INSL6Q9Y581 213 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 HCFC2Q9Y5Z7 792 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 MYOFQ9NZM1 2061 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 A0A0G2JLL6 359 aaPredicted RBP8.24□□□□□ -1.09
SIX4-202ENST00000554079 A0A1W2PP11 408 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 J3QR06 171 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 CST7O76096 145 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 VENTXO95231 258 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 GPR6P46095 362 aaPredicted RBP8.24□□□□□ -1.09
SIX4-202ENST00000554079 GFRA1P56159 465 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 PSG9Q00887 426 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 FOXL1Q12952 345 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 ZNF154Q13106 437 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 KLHL24Q6TFL4 600 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 GLIPR1L1Q6UWM5 242 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 RSPO2Q6UXX9 243 aaPredicted RBP8.24□□□□□ -1.09
SIX4-202ENST00000554079 ASCL4Q6XD76 172 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 PRRT2Q7Z6L0 340 aaPredicted RBP8.24□□□□□ -1.09
SIX4-202ENST00000554079 COMMD2Q86X83 199 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 DEFB125Q8N687 156 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 OR1B1Q8NGR6 318 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 ZNF721Q8TF20 911 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 RAB11FIP5Q9BXF6 653 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 TMEM59Q9BXS4 323 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 NRN1Q9NPD7 142 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 KLHL13Q9P2N7 655 aa8.24□□□□□ -1.09
SIX4-202ENST00000554079 TBL2Q9Y4P3 447 aaKnown RBP8.24□□□□□ -1.09
SIX4-202ENST00000554079 KMT2EQ8IZD2 1858 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 TMEM131Q92545 1883 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 C17orf102A2RUQ5 167 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 ZNF737O75373 536 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 TMEM50AO95807 157 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 C3orf79P0CE67 100 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms