RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 LRRC45Q96CN5 670 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 RNF145Q96MT1 663 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 CATSPER2Q96P56 530 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 OR2M4Q96R27 311 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 AGMATQ9BSE5 352 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF2Q9BSG1 426 aaPredicted RBP2□□□□□ -2.09
SCFD1-210ENST00000553693 MED10Q9BTT4 135 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 TIPINQ9BVW5 301 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 RRAGDQ9NQL2 400 aaPredicted RBP2□□□□□ -2.09
SCFD1-210ENST00000553693 OPN4Q9UHM6 478 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 OR51B2Q9Y5P1 312 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 SPENQ96T58 3664 aaKnown RBP2□□□□□ -2.09
SCFD1-210ENST00000553693 NIPBLQ6KC79 2804 aaeCLIP1.99□□□□□ -2.09
SCFD1-210ENST00000553693 TCHHQ07283 1943 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 CSMD1Q96PZ7 3565 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 NBASA2RRP1 2371 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 AKAP9Q99996 3911 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 IGLV1-36A0A0B4J1U3 117 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 IGHV5-51A0A0C4DH38 117 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 ANKRD20A5PA0PJZ0 165 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 PLAC8L1A1L4L8 177 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 ISPDA4D126 451 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 TVP23AA6NH52 213 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF705GA8MUZ8 300 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-210ENST00000553693 PRAMEF26H0Y7S4 382 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF593O00488 134 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-210ENST00000553693 CD5LO43866 347 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 GMDSO60547 372 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 EIF1BO60739 113 aaKnown RBP1.99□□□□□ -2.09
SCFD1-210ENST00000553693 GATBO75879 557 aaKnown RBP1.99□□□□□ -2.09
SCFD1-210ENST00000553693 VAPBO95292 243 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 TACSTD2P09758 323 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 OR5AL1P0C617 328 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 CCL4P13236 92 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 IL12BP29460 328 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 CD70P32970 193 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 EIF1P41567 113 aaKnown RBP1.99□□□□□ -2.09
SCFD1-210ENST00000553693 PSMD8P48556 350 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 CACNG7P62955 275 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 CCL7P80098 99 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 RPL18AQ02543 176 aaKnown RBP1.99□□□□□ -2.09
SCFD1-210ENST00000553693 DEFB109BQ30KR1 87 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 TMEM255AQ5JRV8 349 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 AP1ARQ63HQ0 302 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 DNAJC24Q6P3W2 148 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 UGT2A3Q6UWM9 527 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 LYPD2Q6UXB3 125 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 FAM92BQ6ZTR7 304 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 LINC00336Q6ZUF6 198 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF720Q7Z2F6 126 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 HMGN2P46Q86SG4 172 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 LRRC6Q86X45 466 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 CDKL3Q8IVW4 592 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-210ENST00000553693 STK40Q8N2I9 435 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 STPG2Q8N412 459 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 NPWQ8N729 165 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF709Q8N972 641 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 C19orf18Q8NEA5 215 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 MNS1Q8NEH6 495 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 ATP6V1C2Q8NEY4 427 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 OR8G5Q8NG78 346 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 OR10AD1Q8NGE0 317 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 OR1J4Q8NGS1 313 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 COQ8AQ8NI60 647 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 ZFAND1Q8TCF1 268 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 RXFP4Q8TDU9 374 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 PDXPQ96GD0 296 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 RDH12Q96NR8 316 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 VAT1Q99536 393 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 SULT4A1Q9BR01 284 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 TIMM29Q9BSF4 260 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 EMC6Q9BV81 110 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 CHID1Q9BWS9 393 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 OSBPL11Q9BXB4 747 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 TCEAL2Q9H3H9 227 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-210ENST00000553693 ENOPH1Q9UHY7 261 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 SCML1Q9UN30 329 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 AP3M1Q9Y2T2 418 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 TACC2O95359 2948 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 SPTBN1Q01082 2364 aaKnown RBP1.99□□□□□ -2.09
SCFD1-210ENST00000553693 ZFHX3Q15911 3703 aa1.99□□□□□ -2.09
SCFD1-210ENST00000553693 MED13Q9UHV7 2174 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 CSMD2Q7Z408 3487 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 F8P00451 2351 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 LRP4O75096 1905 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 IGLV1-50A0A075B6I6 118 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SMIM26A0A096LP01 95 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SPTY2D1-AS1A0A0U1RR47 76 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 FAM240AA0A1B0GVK7 77 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 D6RAR5 112 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 NDUFC2-KCTD14E9PQ53 114 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 hCG_2039718K7EN88 272 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 RAD51BO15315 384 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 AQP9O43315 295 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 ANGPTL7O43827 346 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 SC5DO75845 299 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 VAMP5O95183 116 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 FADS2O95864 444 aaKnown RBP1.98□□□□□ -2.09
SCFD1-210ENST00000553693 TNNC2P02585 160 aa1.98□□□□□ -2.09
SCFD1-210ENST00000553693 MMP7P09237 267 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms