RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 POC1AQ8NBT0 407 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 SCCPDHQ8NBX0 429 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 OR8G5Q8NG78 346 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 OR5M9Q8NGP3 310 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 OR1J1Q8NGS3 322 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 ANGPTL6Q8NI99 470 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 STOML3Q8TAV4 291 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 SLC25A40Q8TBP6 338 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 FAM57AQ8TBR7 257 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 KLF14Q8TD94 323 aaPredicted RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 GLYATL2Q8WU03 294 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 C18orf12Q96KH6 178 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 OR10C1Q96KK4 312 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 TOLLIPQ9H0E2 274 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 TLNRD1Q9H1K6 362 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 SLC25A32Q9H2D1 315 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 NAA60Q9H7X0 242 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 HES4Q9HCC6 221 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 ZFP57Q9NU63 452 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 TMEM100Q9NV29 134 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 RASL12Q9NYN1 266 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 PURGQ9UJV8 347 aaKnown RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 MEMO1Q9Y316 297 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 WIPI2Q9Y4P8 454 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 SLC25A15Q9Y619 301 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 DMXL1Q9Y485 3027 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 PIGBOS1A0A0B4J2F0 54 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 C13orf42A0A1B0GVH6 325 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 DUXBA0A1W2PPF3 345 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 KANTRA0A1W2PQU2 76 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 OR5H1A6NKK0 313 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 FAM25EA8MYX2 175 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 EEF1E1-BLOC1S5C9J1V9 151 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 H0YIZ8 118 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 MKRN2OSH3BPM6 223 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 SH2D1BO14796 132 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 DEGS1O15121 323 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 MPPED1O15442 326 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 BCL2L11O43521 198 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 ADAP1O75689 374 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 RHBDL1O75783 438 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 PTBP3O95758 552 aaKnown RBP5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 KNG1P01042 644 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 PPYP01298 95 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 IFNA21P01568 189 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 TK1P04183 234 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 NMBP08949 121 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 CECR9P0C854 216 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 PET100P0DJ07 73 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF250P15622 560 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 PRKACAP17612 351 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 AADACP22760 399 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 GNRHRP30968 328 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 CFHR2P36980 270 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 KRTAP10-2P60368 255 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 SRPXP78539 464 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 PAX5Q02548 391 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 MZT1Q08AG7 82 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF154Q13106 437 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 PDCD1Q15116 288 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF718Q3SXZ3 478 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 C1orf185Q5T7R7 199 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF585AQ6P3V2 769 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 MOB1BQ7L9L4 216 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 BHLHA15Q7RTS1 189 aaPredicted RBP5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 WDR86Q86TI4 376 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 C11orf53Q8IXP5 236 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 EIF4E3Q8N5X7 224 aaKnown RBP5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 INO80EQ8NBZ0 244 aaPredicted RBP5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 OR4A4PQ8NGN8 299 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 LILRB1Q8NHL6 650 aaPredicted RBP5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 LRRC20Q8TCA0 184 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 MRPL30Q8TCC3 161 aaKnown RBP5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 RTN4IP1Q8WWV3 396 aaPredicted RBP5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 ST8SIA2Q92186 375 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 MSI2Q96DH6 328 aaKnown RBP5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 TMEM56Q96MV1 263 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 AQP10Q96PS8 301 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 NRIP2Q9BQI9 281 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 CABLES2Q9BTV7 478 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 SFXN3Q9BWM7 321 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 REG4Q9BYZ8 158 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 DNTTIP1Q9H147 329 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 CXXC4Q9H2H0 198 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 METTL8Q9H825 291 aaKnown RBP5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 TMEM165Q9HC07 324 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 SLC2A9Q9NRM0 540 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 MBD2Q9UBB5 411 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 TMED3Q9Y3Q3 217 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 FAM215AQ9Y5M1 114 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 TMEM56-RWDD3S4R434 201 aa5.09□□□□□ -1.59
VIPAS39-204ENST00000553576 DSCAMO60469 2012 aa5.09□□□□□ -1.6
VIPAS39-204ENST00000553576 TANC2Q9HCD6 1990 aa5.09□□□□□ -1.6
VIPAS39-204ENST00000553576 ZFHX4Q86UP3 3567 aa5.09□□□□□ -1.6
VIPAS39-204ENST00000553576 IGHV2OR16-5A0A0B4J2B6 119 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 IGHV1-18A0A0C4DH31 117 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 IGKV1-6A0A0C4DH72 117 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 A0A1W2PR80 420 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 FAM221AA4D161 298 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 CLEC18AA5D8T8 446 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms