RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 KCTD4Q8WVF5 259 aa1.15□□□□□ -2.23
GPN3-209ENST00000551079 ZNF396Q96N95 335 aaPredicted RBP1.15□□□□□ -2.23
GPN3-209ENST00000551079 PITX2Q99697 317 aa1.15□□□□□ -2.23
GPN3-209ENST00000551079 TM6SF2Q9BZW4 377 aa1.15□□□□□ -2.23
GPN3-209ENST00000551079 PHLDA3Q9Y5J5 127 aa1.15□□□□□ -2.23
GPN3-209ENST00000551079 MED13Q9UHV7 2174 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 ODF3BA8MYP8 253 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 E7EWF7 191 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 SPOPO43791 374 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 PDCD6O75340 191 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 STAG3L2P0CL84 134 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 BGNP21810 368 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 CRABP1P29762 137 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 ZNF140P52738 457 aaPredicted RBP1.14□□□□□ -2.23
GPN3-209ENST00000551079 RAB25P57735 213 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 ACTL10Q5JWF8 245 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 SYS1Q8N2H4 156 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 SLC25A45Q8N413 288 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 SPICQ8N5J4 248 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 OR4C16Q8NGL9 310 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 DNAJC30Q96LL9 226 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 SUCNR1Q9BXA5 334 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 KCNIP2Q9NS61 270 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 RABL2AQ9UBK7 228 aaPredicted RBP1.14□□□□□ -2.23
GPN3-209ENST00000551079 PSORS1C2Q9UIG4 136 aa1.14□□□□□ -2.23
GPN3-209ENST00000551079 YLPM1P49750 1951 aaKnown RBP1.14□□□□□ -2.23
GPN3-209ENST00000551079 IGHV3OR15-7A0A075B7D8 119 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 TMEM250H0YL14 139 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 SLC25A20O43772 301 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 VAPBO95292 243 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 IGKV5-2P06315 115 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 CPN2P22792 545 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 BAXQ07812 192 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 APOFQ13790 326 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 FAHD1Q6P587 224 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 C10orf107Q8IVU9 208 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 ZNF321PQ8N8H1 164 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 CDKL2Q92772 493 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 CLDN23Q96B33 292 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 CIB1Q99828 191 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 APOL4Q9BPW4 351 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 POMPQ9Y244 141 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 CHTOPQ9Y3Y2 248 aaKnown RBP1.13□□□□□ -2.23
GPN3-209ENST00000551079 SLIT2O94813 1529 aa1.13□□□□□ -2.23
GPN3-209ENST00000551079 COL4A2P08572 1712 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 ERICH4A6NGS2 130 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 ARGFXA6NJG6 315 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 ENSAO43768 121 aaKnown RBP1.12□□□□□ -2.23
GPN3-209ENST00000551079 ZNF189O75820 626 aaPredicted RBP1.12□□□□□ -2.23
GPN3-209ENST00000551079 DEKP35659 375 aaKnown RBP1.12□□□□□ -2.23
GPN3-209ENST00000551079 DNASE1L1P49184 302 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 ATP5J2P56134 94 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 RHOAP61586 193 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 HBG1P69891 147 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 HBG2P69892 147 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 KRTAP5-10Q6L8G5 202 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 CLEC20AQ6ZU45 233 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 PID1Q7Z2X4 250 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 OR8G5Q8NG78 346 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 OR4K17Q8NGC6 315 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 CD200R1Q8TD46 325 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 CACNG8Q8WXS5 425 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 DDIT4LQ96D03 193 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 COPS4Q9BT78 406 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 ALX4Q9H161 411 aaPredicted RBP1.12□□□□□ -2.23
GPN3-209ENST00000551079 TAS2R9Q9NYW1 312 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 STMN3Q9NZ72 180 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 BTRCQ9Y297 605 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 COL4A1P02462 1669 aa1.12□□□□□ -2.23
GPN3-209ENST00000551079 LOC102725191A0A1B0GVB3 256 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 A0A1W2PQL4 384 aaPredicted RBP1.11□□□□□ -2.23
GPN3-209ENST00000551079 A0A1W2PRG6 482 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 C19orf71A6NCJ1 209 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 FAM183AA6NL82 134 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 I3L4J1 428 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 SC5DO75845 299 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 RAB36O95755 333 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 OTCP00480 354 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 ZNF3P17036 446 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 PYCR1P32322 319 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 CBX5P45973 191 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 GABRA4P48169 554 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 INPP1P49441 399 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 PRDX4Q13162 271 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 SS18Q15532 418 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 OR8G1Q15617 311 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 HNRNPA1L2Q32P51 320 aaKnown RBP1.11□□□□□ -2.23
GPN3-209ENST00000551079 LAMTOR1Q6IAA8 161 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 SLC25A25Q6KCM7 469 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 SSX7Q7RTT5 188 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 FAM58AQ8N1B3 248 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 ASCC1Q8N9N2 400 aaKnown RBP1.11□□□□□ -2.23
GPN3-209ENST00000551079 GATD1Q8NB37 220 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 LGALS14Q8TCE9 139 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 SPPL2BQ8TCT7 592 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 MITD1Q8WV92 249 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 CIDECQ96AQ7 238 aaPredicted RBP1.11□□□□□ -2.23
GPN3-209ENST00000551079 ZMYND19Q96E35 227 aaPredicted RBP1.11□□□□□ -2.23
GPN3-209ENST00000551079 BCL7BQ9BQE9 202 aa1.11□□□□□ -2.23
GPN3-209ENST00000551079 BCL2L14Q9BZR8 327 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms