RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 C11orf87Q6NUJ2 197 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 SATL1Q86VE3 508 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 SYS1Q8N2H4 156 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 KLHL30-AS1Q8NEE0 82 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 ALG8Q9BVK2 526 aa18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 EXOGQ9Y2C4 368 aaKnown RBP18.27■□□□□ 0.52
SMARCD1-209ENST00000550477 IGKV1D-33P01593 117 aa18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 IGKV1-33P01594 117 aa18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 IGHV3-7P01780 117 aa18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 GAPDHP04406 335 aaKnown RBP18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 RAB3AP20336 220 aa18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 GZMHP20718 246 aa18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 TEX38Q6PEX7 206 aa18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 C8orf86Q6ZUL3 223 aa18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 OR13A1Q8NGR1 328 aa18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 Q96MT0 163 aa18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 NOL4LQ96MY1 436 aaPredicted RBP18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 LINC00574Q9H8X3 128 aa18.26■□□□□ 0.51
SMARCD1-209ENST00000550477 A0A1W2PPI3 338 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 NPIPB11E5RHQ5 1161 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 RAMP3O60896 148 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 FADS2O95864 444 aaKnown RBP18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 GNG10P50151 68 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 GBX2P52951 348 aaPredicted RBP18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 DGCR2P98153 550 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 RNF144BQ7Z419 303 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 LHFPL3Q86UP9 236 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 ZNF695Q8IW36 515 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 RFESDQ8TAC1 157 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 MRGPRDQ8TDS7 321 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 TNFAIP8L1Q8WVP5 186 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 LEAP2Q969E1 77 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 S100A13Q99584 98 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 FAM192AQ9GZU8 254 aa18.25■□□□□ 0.51
SMARCD1-209ENST00000550477 TRAV24A0A0B4J272 114 aa18.24■□□□□ 0.51
SMARCD1-209ENST00000550477 NCBP2LA6PVI3 153 aaKnown RBP18.24■□□□□ 0.51
SMARCD1-209ENST00000550477 MPZL2O60487 215 aa18.24■□□□□ 0.51
SMARCD1-209ENST00000550477 IGHG2P01859 326 aa18.24■□□□□ 0.51
SMARCD1-209ENST00000550477 CD2P06729 351 aa18.24■□□□□ 0.51
SMARCD1-209ENST00000550477 PAX5Q02548 391 aa18.24■□□□□ 0.51
SMARCD1-209ENST00000550477 ETV3LQ6ZN32 361 aa18.24■□□□□ 0.51
SMARCD1-209ENST00000550477 MOB3BQ86TA1 216 aa18.24■□□□□ 0.51
SMARCD1-209ENST00000550477 STPG2Q8N412 459 aa18.24■□□□□ 0.51
SMARCD1-209ENST00000550477 AP4M1O00189 453 aa18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 HSD17B6O14756 317 aa18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 ZFPL1O95159 310 aa18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 CSTBP04080 98 aaKnown RBP18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 ALPLP05186 524 aa18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 NHLRC4P0CG21 123 aaPredicted RBP18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 ZSCAN26Q16670 478 aa18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 PNLIPRP3Q17RR3 467 aa18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 RSBN1Q5VWQ0 802 aaPredicted RBP18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 LGALS12Q96DT0 336 aa18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 LINC00527Q9UJ94 153 aa18.23■□□□□ 0.51
SMARCD1-209ENST00000550477 CCRL2O00421 344 aa18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 HTR3BO95264 441 aa18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 IL3RAP26951 378 aa18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 RAB25P57735 213 aa18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 ZNF816Q0VGE8 651 aaPredicted RBP18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 CXorf66Q5JRM2 361 aaPredicted RBP18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 UTF1Q5T230 341 aa18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 LPCAT4Q643R3 524 aa18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 TGIF2LXQ8IUE1 241 aa18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 OR2T10Q8NGZ9 312 aa18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 P2RX4Q99571 388 aa18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 DPCDQ9BVM2 203 aaPredicted RBP18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 PAK1IP1Q9NWT1 392 aaPredicted RBP18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 GMPPBQ9Y5P6 360 aa18.22■□□□□ 0.51
SMARCD1-209ENST00000550477 RRP9O43818 475 aaKnown RBP18.21■□□□□ 0.51
SMARCD1-209ENST00000550477 ZIK1Q3SY52 487 aaPredicted RBP18.21■□□□□ 0.51
SMARCD1-209ENST00000550477 PDCD1LG2Q9BQ51 273 aa18.21■□□□□ 0.51
SMARCD1-209ENST00000550477 METTL9Q9H1A3 318 aa18.21■□□□□ 0.51
SMARCD1-209ENST00000550477 RAB9BQ9NP90 201 aa18.21■□□□□ 0.51
SMARCD1-209ENST00000550477 LIN7CQ9NUP9 197 aaKnown RBP18.21■□□□□ 0.51
SMARCD1-209ENST00000550477 ST3GAL6Q9Y274 331 aa18.21■□□□□ 0.51
SMARCD1-209ENST00000550477 DNAH3Q8TD57 4116 aa18.21■□□□□ 0.5
SMARCD1-209ENST00000550477 IGHV1-3A0A0C4DH29 117 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 CCL24O00175 119 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 GABRPO00591 440 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 EI24O14681 340 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 OR7C1O76099 320 aaPredicted RBP18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 SSTR5P35346 364 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 ALDH3A2P51648 485 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 RAB40BQ12829 278 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 EBI3Q14213 229 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 DIAPH2-AS1Q14236 149 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 LINC00596Q86U02 117 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 SUMF2Q8NBJ7 301 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 OR52M1Q8NGK5 317 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 OR5M8Q8NGP6 311 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 OR8U1Q8NH10 309 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 ISG20L2Q9H9L3 353 aaKnown RBP18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 ING4Q9UNL4 249 aa18.2■□□□□ 0.5
SMARCD1-209ENST00000550477 TMEM30CPA0ZSE6 113 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 H0YHG0 523 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 VSIG8P0DPA2 414 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 PIGYQ3MUY2 71 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 C18orf65Q6ZTR6 163 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 Q8NFD4 153 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 PLPPR1Q8TBJ4 325 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms