RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 IL13RA2Q14627 380 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 FAM74A1Q5RGS3 127 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 TIMM23BQ5SRD1 257 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 ZNF818PQ6ZRF7 136 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 LHFPL5Q8TAF8 219 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 GLYATL2Q8WU03 294 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 MUCL1Q96DR8 90 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 SPACA1Q9HBV2 294 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 AMDHD2Q9Y303 409 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 MSRB2Q9Y3D2 182 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 CHD3Q12873 2000 aaKnown RBP17.7■□□□□ 0.42
PRDM4-205ENST00000550376 LEUTXA8MZ59 168 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 ATP6V1G2-DDX39BF2Z307 99 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 PRRG2O14669 202 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 TMEM187Q14656 261 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 RGS7BPQ6MZT1 257 aaPredicted RBP17.7■□□□□ 0.42
PRDM4-205ENST00000550376 PCSK4Q6UW60 755 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 GAPTQ8N292 157 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 BOLLQ8N9W6 283 aaKnown RBP17.7■□□□□ 0.42
PRDM4-205ENST00000550376 POC1AQ8NBT0 407 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 C2orf50Q96LR7 162 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 GSX2Q9BZM3 304 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 CCL28Q9NRJ3 127 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 METRNQ9UJH8 293 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 KCNIP3Q9Y2W7 256 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 A0A0B4J2A0 478 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 LUMP51884 338 aaPredicted RBP17.7■□□□□ 0.42
PRDM4-205ENST00000550376 WDR82Q6UXN9 313 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 INO80EQ8NBZ0 244 aaPredicted RBP17.7■□□□□ 0.42
PRDM4-205ENST00000550376 SHPKQ9UHJ6 478 aa17.7■□□□□ 0.42
PRDM4-205ENST00000550376 TPRP12270 2363 aaKnown RBP17.7■□□□□ 0.42
PRDM4-205ENST00000550376 SCGB1D2O95969 90 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 ACOT7LQ6ZUV0 252 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 SLC38A6Q8IZM9 456 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 KCNRGQ8N5I3 272 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 TPRX1Q8N7U7 411 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 POM121Q96HA1 1249 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 RSRP1Q9BUV0 290 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 SFXN3Q9BWM7 321 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 ZNF471Q9BX82 626 aaPredicted RBP17.69■□□□□ 0.42
PRDM4-205ENST00000550376 CXXC4Q9H2H0 198 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 TRAPPC2LQ9UL33 140 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 PRSS44E7EML9 344 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 PTBP3O95758 552 aaKnown RBP17.69■□□□□ 0.42
PRDM4-205ENST00000550376 HAND1O96004 215 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 KITLGP21583 273 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 GALNT11Q8NCW6 608 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 PIK3IP1Q96FE7 263 aa17.69■□□□□ 0.42
PRDM4-205ENST00000550376 PARP12Q9H0J9 701 aaKnown RBP17.69■□□□□ 0.42
PRDM4-205ENST00000550376 ATXN7O15265 892 aaPredicted RBP17.68■□□□□ 0.42
PRDM4-205ENST00000550376 CRYAAP02489 173 aa17.68■□□□□ 0.42
PRDM4-205ENST00000550376 LINC00596Q86U02 117 aa17.68■□□□□ 0.42
PRDM4-205ENST00000550376 SLC5A7Q9GZV3 580 aa17.68■□□□□ 0.42
PRDM4-205ENST00000550376 SH2D1BO14796 132 aa17.68■□□□□ 0.42
PRDM4-205ENST00000550376 DIRAS3O95661 229 aa17.68■□□□□ 0.42
PRDM4-205ENST00000550376 CCKARP32238 428 aa17.68■□□□□ 0.42
PRDM4-205ENST00000550376 RAB14P61106 215 aa17.68■□□□□ 0.42
PRDM4-205ENST00000550376 SNTB1Q13884 538 aaKnown RBP17.68■□□□□ 0.42
PRDM4-205ENST00000550376 OR1S1Q8NH92 325 aa17.68■□□□□ 0.42
PRDM4-205ENST00000550376 CXorf58Q96LI9 332 aa17.68■□□□□ 0.42
PRDM4-205ENST00000550376 USB1Q9BQ65 265 aaKnown RBP17.68■□□□□ 0.42
PRDM4-205ENST00000550376 TREM2Q9NZC2 230 aa17.68■□□□□ 0.42
PRDM4-205ENST00000550376 ERRFI1Q9UJM3 462 aaPredicted RBP17.68■□□□□ 0.42
PRDM4-205ENST00000550376 PKDREJQ9NTG1 2253 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.67■□□□□ 0.42
PRDM4-205ENST00000550376 KIR2DS1A0A191URI9 304 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 ZSCAN5BA6NJL1 495 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 KIR2DS4P43632 304 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 CYCSP99999 105 aaKnown RBP17.67■□□□□ 0.42
PRDM4-205ENST00000550376 AESQ08117 197 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 KIR2DS1Q14954 304 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 ZNF146Q15072 292 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 MBNL2Q5VZF2 373 aaKnown RBP17.67■□□□□ 0.42
PRDM4-205ENST00000550376 TBC1D26Q86UD7 250 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 ZNF565Q8N9K5 539 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 A0A0D9SG52 128 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 KANTRA0A1W2PQU2 76 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 MPPED1O15442 326 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 SPRY3O43610 288 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 IL15RAQ13261 267 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 CLLU1Q5K131 121 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 Q6ZS49 121 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 MSI2Q96DH6 328 aaKnown RBP17.67■□□□□ 0.42
PRDM4-205ENST00000550376 DHRS9Q9BPW9 319 aa17.67■□□□□ 0.42
PRDM4-205ENST00000550376 ESRP2Q9H6T0 727 aaKnown RBP17.67■□□□□ 0.42
PRDM4-205ENST00000550376 TMEM210A6NLX4 147 aa17.66■□□□□ 0.42
PRDM4-205ENST00000550376 F5H0A9 414 aaPredicted RBP17.66■□□□□ 0.42
PRDM4-205ENST00000550376 OR2F2O95006 317 aa17.66■□□□□ 0.42
PRDM4-205ENST00000550376 OR2F1Q13607 317 aa17.66■□□□□ 0.42
PRDM4-205ENST00000550376 CLEC9AQ6UXN8 241 aa17.66■□□□□ 0.42
PRDM4-205ENST00000550376 SLC51BQ86UW2 128 aa17.66■□□□□ 0.42
PRDM4-205ENST00000550376 Q8IYB0 196 aa17.66■□□□□ 0.42
PRDM4-205ENST00000550376 ST8SIA2Q92186 375 aa17.66■□□□□ 0.42
PRDM4-205ENST00000550376 LSM5Q9Y4Y9 91 aaKnown RBP17.66■□□□□ 0.42
PRDM4-205ENST00000550376 KCNJ3P48549 501 aa17.66■□□□□ 0.42
PRDM4-205ENST00000550376 ZNF497Q6ZNH5 498 aa17.66■□□□□ 0.42
PRDM4-205ENST00000550376 OR10J5Q8NHC4 309 aa17.66■□□□□ 0.42
PRDM4-205ENST00000550376 C3orf85A0A1B0GTC6 90 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 UCP3P55916 312 aa17.65■□□□□ 0.42
PRDM4-205ENST00000550376 HLA-DRB3P79483 266 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms