RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 SMIM23A6NLE4 172 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 C8orf87E5RJ46 101 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 F5H768 121 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 H3BP45 60 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 LGALS9O00182 355 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 BIRC5O15392 142 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 ZW10O43264 779 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 EPPINO95925 133 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 HLA-DQB1P01920 261 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 ZNF806P0C7X5 589 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 SCGB1C2P0DMR2 95 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 MPIP34949 423 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 CBX5P45973 191 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 PSMD7P51665 324 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 CMC4P56277 68 aaPredicted RBP1.72□□□□□ -2.13
CCDC38-208ENST00000549876 CLDN12P56749 244 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 ATP5G2Q06055 141 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 ITGB3BPQ13352 177 aaPredicted RBP1.72□□□□□ -2.13
CCDC38-208ENST00000549876 BTN1A1Q13410 526 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 FAM53BQ14153 422 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 ZNF235Q14590 738 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 PAFAH1B3Q15102 231 aaKnown RBP1.72□□□□□ -2.13
CCDC38-208ENST00000549876 IGFBP7Q16270 282 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 GOLGA7BQ2TAP0 167 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 DNAL1Q4LDG9 190 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 TTC33Q6PID6 262 aaPredicted RBP1.72□□□□□ -2.13
CCDC38-208ENST00000549876 SPNS3Q6ZMD2 512 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 FAM19A5Q7Z5A7 132 aaPredicted RBP1.72□□□□□ -2.13
CCDC38-208ENST00000549876 PDPNQ86YL7 162 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 ITPRIPQ8IWB1 547 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 ZDHHC22Q8N966 263 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 ZIC4Q8N9L1 334 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 SPANXA2-OT1Q8N9U9 137 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 SCGB1C1Q8TD33 95 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 L3HYPDHQ96EM0 354 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 KCTD7Q96MP8 289 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 OLFM3Q96PB7 478 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 RNF157Q96PX1 679 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 DERL3Q96Q80 235 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 PRSS27Q9BQR3 290 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 THTPAQ9BU02 230 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 EBPLQ9BY08 206 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 SLC22A4Q9H015 551 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 LRRC19Q9H756 370 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 SND1-IT1Q9HBX3 110 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 DMAC2Q9NW81 257 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 RIMS2Q9UQ26 1411 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 TINCRA0A1B0GVN0 87 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 GMNCA6NCL1 334 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 LRRN3E7EW58 273 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 TMEM250H0YL14 139 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 M0QZ92 97 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 SSNA1O43805 119 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 OR7C2O60412 319 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 STX10O60499 249 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 CCNKO75909 580 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 SERPINA6P08185 405 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 SOD3P08294 240 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 UGT2B7P16662 529 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 GRPRP30550 384 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 CD79BP40259 229 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 NUDT2P50583 147 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 ELF3P78545 371 aaPredicted RBP1.71□□□□□ -2.14
CCDC38-208ENST00000549876 GTF2BQ00403 316 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 MLLT11Q13015 90 aaPredicted RBP1.71□□□□□ -2.14
CCDC38-208ENST00000549876 C4orf26Q17RF5 130 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 HLA-DRB5Q30154 266 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 OGFRL1Q5TC84 451 aaPredicted RBP1.71□□□□□ -2.14
CCDC38-208ENST00000549876 FAM104BQ5XKR9 115 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 TMEM215Q68D42 235 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 ZNF773Q6PK81 442 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 CASP12Q6UXS9 341 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 CLEC20AQ6ZU45 233 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 FA2HQ7L5A8 372 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 CPNE9Q8IYJ1 553 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 ZNF101Q8IZC7 436 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 STK40Q8N2I9 435 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 Q8N402 240 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 SLC35G3Q8N808 338 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 GATD1Q8NB37 220 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 TWIST2Q8WVJ9 160 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 RBMXL1Q96E39 390 aaKnown RBP1.71□□□□□ -2.14
CCDC38-208ENST00000549876 LINC01587Q99440 93 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 DOK1Q99704 481 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 RNF5Q99942 180 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 DHRS9Q9BPW9 319 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 ANAPC13Q9BS18 74 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 MS4A8Q9BY19 250 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 PARD6GQ9BYG4 376 aaPredicted RBP1.71□□□□□ -2.14
CCDC38-208ENST00000549876 CHST5Q9GZS9 411 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 ARL6Q9H0F7 186 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 ZSCAN16Q9H4T2 348 aaPredicted RBP1.71□□□□□ -2.14
CCDC38-208ENST00000549876 PSTPIP2Q9H939 334 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 C14orf166Q9Y224 244 aaKnown RBP1.71□□□□□ -2.14
CCDC38-208ENST00000549876 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.71□□□□□ -2.14
CCDC38-208ENST00000549876 POLR3HQ9Y535 204 aaPredicted RBP1.71□□□□□ -2.14
CCDC38-208ENST00000549876 TSPOAP1O95153 1857 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 ABCC11Q96J66 1382 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 FBN3Q75N90 2809 aa1.71□□□□□ -2.14
CCDC38-208ENST00000549876 VWA8A3KMH1 1905 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms