RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 OCM2P0CE71 109 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 HLA-DMAP28067 261 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 TBC1D28Q2M2D7 210 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 SLC36A2Q495M3 483 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 CDKL4Q5MAI5 379 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 KPRPQ5T749 579 aaPredicted RBP2.34□□□□□ -2.03
SNRPF-202ENST00000549580 TBPL2Q6SJ96 375 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 ZIC4Q8N9L1 334 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 DNAAF3Q8N9W5 541 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 ZFP62Q8NB50 900 aaPredicted RBP2.34□□□□□ -2.03
SNRPF-202ENST00000549580 OR52E4Q8NGH9 312 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 STOML3Q8TAV4 291 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 ITLN2Q8WWU7 325 aaPredicted RBP2.34□□□□□ -2.03
SNRPF-202ENST00000549580 FXYD5Q96DB9 178 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 OLFM3Q96PB7 478 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 PEBP4Q96S96 227 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 C1orf50Q9BV19 199 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 RSPO3Q9BXY4 272 aaPredicted RBP2.34□□□□□ -2.03
SNRPF-202ENST00000549580 ZNF436Q9C0F3 470 aaPredicted RBP2.34□□□□□ -2.03
SNRPF-202ENST00000549580 NSRP1Q9H0G5 558 aaKnown RBP2.34□□□□□ -2.03
SNRPF-202ENST00000549580 PLEKHJ1Q9NW61 149 aa2.34□□□□□ -2.03
SNRPF-202ENST00000549580 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.34□□□□□ -2.03
SNRPF-202ENST00000549580 MYO3BQ8WXR4 1341 aa2.34□□□□□ -2.04
SNRPF-202ENST00000549580 MYO15BQ96JP2 1530 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 MIA3Q5JRA6 1907 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 BAZ2AQ9UIF9 1905 aaKnown RBP2.33□□□□□ -2.04
SNRPF-202ENST00000549580 K7EM74 188 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 MFNGO00587 321 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 ZW10O43264 779 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 TCF21O43680 179 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 GRPRP30550 384 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 HSPA13P48723 471 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 ZNF83P51522 516 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 PAFAH1B3Q15102 231 aaKnown RBP2.33□□□□□ -2.04
SNRPF-202ENST00000549580 LY6EQ16553 131 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 KRTAP13-2Q52LG2 175 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 KHDRBS2Q5VWX1 349 aaKnown RBP2.33□□□□□ -2.04
SNRPF-202ENST00000549580 DNM1P34Q6PK57 102 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 MTERF4Q7Z6M4 381 aaKnown RBP2.33□□□□□ -2.04
SNRPF-202ENST00000549580 MUC15Q8N387 334 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 OR2M3Q8NG83 312 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 OR2K2Q8NGT1 345 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 C2orf15Q8WU43 125 aaKnown RBP2.33□□□□□ -2.04
SNRPF-202ENST00000549580 CLDN23Q96B33 292 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 PRSS27Q9BQR3 290 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 SPZ1Q9BXG8 430 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 EBPLQ9BY08 206 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 MARCOQ9UEW3 520 aaPredicted RBP2.33□□□□□ -2.04
SNRPF-202ENST00000549580 HMGXB4Q9UGU5 601 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 POMPQ9Y244 141 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 SLC22A7Q9Y694 548 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 RAB3GAP2Q9H2M9 1393 aa2.33□□□□□ -2.04
SNRPF-202ENST00000549580 C8orf87E5RJ46 101 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 EPPINO95925 133 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 ASS1P00966 412 aaKnown RBP2.32□□□□□ -2.04
SNRPF-202ENST00000549580 NRASP01111 189 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 HRASP01112 189 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 KRASP01116 189 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 PSKH1P11801 424 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 MLNP12872 115 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 GTF2F2P13984 249 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 CNTFRP26992 372 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 COILP38432 576 aaPredicted RBP2.32□□□□□ -2.04
SNRPF-202ENST00000549580 CLDN12P56749 244 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 MAGOHP61326 146 aaKnown RBP2.32□□□□□ -2.04
SNRPF-202ENST00000549580 DYNLL1P63167 89 aaKnown RBP2.32□□□□□ -2.04
SNRPF-202ENST00000549580 GTF2BQ00403 316 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 FAM53BQ14153 422 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 ZNF235Q14590 738 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 PDZD11Q5EBL8 140 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 DNLZQ5SXM8 178 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 CASP12Q6UXS9 341 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 SPNS3Q6ZMD2 512 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 CLEC20AQ6ZU45 233 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 DPPA2Q7Z7J5 298 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 DAZ4Q86SG3 579 aaKnown RBP2.32□□□□□ -2.04
SNRPF-202ENST00000549580 ZNF2Q9BSG1 426 aaPredicted RBP2.32□□□□□ -2.04
SNRPF-202ENST00000549580 DAZ1Q9NQZ3 744 aaKnown RBP2.32□□□□□ -2.04
SNRPF-202ENST00000549580 BTRCQ9Y297 605 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 TBL2Q9Y4P3 447 aaKnown RBP2.32□□□□□ -2.04
SNRPF-202ENST00000549580 MTCH2Q9Y6C9 303 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 POLR3AO14802 1390 aaPredicted RBP2.32□□□□□ -2.04
SNRPF-202ENST00000549580 ADCY9O60503 1353 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 TICRRQ7Z2Z1 1910 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 ATRNO75882 1429 aa2.32□□□□□ -2.04
SNRPF-202ENST00000549580 KIF26AQ9ULI4 1882 aaPredicted RBP2.31□□□□□ -2.04
SNRPF-202ENST00000549580 PLXNB3Q9ULL4 1909 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 TRIP11Q15643 1979 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 GOLGA6L4A6NEF3 574 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 TMEM250H0YL14 139 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 SLC16A4O15374 487 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 SSNA1O43805 119 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 STX10O60499 249 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 KCNK2O95069 426 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 AHSA1O95433 338 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 FSTL3O95633 263 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 APOEP02649 317 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 IGLV7-43P04211 117 aa2.31□□□□□ -2.04
SNRPF-202ENST00000549580 CD99P14209 185 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms