RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 TMPRSS13Q9BYE2 586 aa17.36■□□□□ 0.37
CACNB3-210ENST00000548874 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.36■□□□□ 0.37
CACNB3-210ENST00000548874 KCNS2Q9ULS6 477 aa17.36■□□□□ 0.37
CACNB3-210ENST00000548874 MEIKINA0A087WXM9 373 aa17.35■□□□□ 0.37
CACNB3-210ENST00000548874 HPGDSO60760 199 aa17.35■□□□□ 0.37
CACNB3-210ENST00000548874 DLX6P56179 175 aa17.35■□□□□ 0.37
CACNB3-210ENST00000548874 ARL6IP1Q15041 203 aa17.35■□□□□ 0.37
CACNB3-210ENST00000548874 CLEC9AQ6UXN8 241 aa17.35■□□□□ 0.37
CACNB3-210ENST00000548874 S100A16Q96FQ6 103 aaKnown RBP17.35■□□□□ 0.37
CACNB3-210ENST00000548874 OR6C3Q9NZP0 311 aa17.35■□□□□ 0.37
CACNB3-210ENST00000548874 AK3Q9UIJ7 227 aa17.35■□□□□ 0.37
CACNB3-210ENST00000548874 UBE2J1Q9Y385 318 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-210ENST00000548874 KPTNQ9Y664 436 aa17.35■□□□□ 0.37
CACNB3-210ENST00000548874 NAPSAO96009 420 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 CGB3P0DN86 165 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 CGB7P0DN87 165 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 GNB3P16520 340 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 CCL3L1P16619 93 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 ELK1P19419 428 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 CDK2P24941 298 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 CR1LQ2VPA4 569 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 OLFML2AQ68BL7 652 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 C11orf42Q8N5U0 333 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 OR13A1Q8NGR1 328 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 MRPL30Q8TCC3 161 aaKnown RBP17.34■□□□□ 0.37
CACNB3-210ENST00000548874 PHF21AQ96BD5 680 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 SIRPDQ9H106 197 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 MIXL1Q9H2W2 232 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 GSX1Q9H4S2 264 aaPredicted RBP17.34■□□□□ 0.37
CACNB3-210ENST00000548874 DIABLOQ9NR28 239 aa17.34■□□□□ 0.37
CACNB3-210ENST00000548874 WNK2Q9Y3S1 2297 aa17.33■□□□□ 0.37
CACNB3-210ENST00000548874 TRGV10A0A0A0MS01 117 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 A0A1W2PPH5 198 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 MEX3AA1L020 520 aaKnown RBP17.33■□□□□ 0.36
CACNB3-210ENST00000548874 SERPINE3A8MV23 424 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 M0R1W7 72 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 CTDSP2O14595 271 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 XRCC3O43542 346 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 ZNF728P0DKX0 622 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 MMP9P14780 707 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 ARF6P62330 175 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 ZNF260Q3ZCT1 412 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 CDNFQ49AH0 187 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 FAHD2BQ6P2I3 314 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-210ENST00000548874 C1orf122Q6ZSJ8 110 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 Q8N7P7 452 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 MCFD2Q8NI22 146 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 FAHD2AQ96GK7 314 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 ZNF714Q96N38 554 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 C7orf69Q9H7B7 122 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 ZMAT3Q9HA38 289 aaKnown RBP17.33■□□□□ 0.36
CACNB3-210ENST00000548874 YAE1D1Q9NRH1 226 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 TAS2R3Q9NYW6 316 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 ONECUT1Q9UBC0 465 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 OPN4Q9UHM6 478 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 A3GALT2U3KPV4 340 aa17.33■□□□□ 0.36
CACNB3-210ENST00000548874 TLN2Q9Y4G6 2542 aa17.32■□□□□ 0.36
CACNB3-210ENST00000548874 TRBV6-6A0A0A6YYG2 114 aa17.32■□□□□ 0.36
CACNB3-210ENST00000548874 C17orf98A8MV24 154 aa17.32■□□□□ 0.36
CACNB3-210ENST00000548874 A8MV72 311 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-210ENST00000548874 AVPP01185 164 aa17.32■□□□□ 0.36
CACNB3-210ENST00000548874 GSTP1P09211 210 aaKnown RBP17.32■□□□□ 0.36
CACNB3-210ENST00000548874 Q6ZPA2 131 aa17.32■□□□□ 0.36
CACNB3-210ENST00000548874 TRAPPC6BQ86SZ2 158 aa17.32■□□□□ 0.36
CACNB3-210ENST00000548874 OR4K15Q8NH41 348 aa17.32■□□□□ 0.36
CACNB3-210ENST00000548874 WDFY2Q96P53 400 aa17.32■□□□□ 0.36
CACNB3-210ENST00000548874 HDHD3Q9BSH5 251 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-210ENST00000548874 RIMS4Q9H426 269 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-210ENST00000548874 MBNL3Q9NUK0 354 aaKnown RBP17.32■□□□□ 0.36
CACNB3-210ENST00000548874 AUP1Q9Y679 476 aa17.32■□□□□ 0.36
CACNB3-210ENST00000548874 TRAV18A0A075B6X5 111 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 TRAV39A0A0B4J263 110 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 POM121CA8CG34 1229 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 RBP4P02753 201 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 GLP1RP43220 463 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 METTL11BQ5VVY1 283 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 ZNF880Q6PDB4 577 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 C1orf229Q6ZS94 237 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-210ENST00000548874 LAX1Q8IWV1 398 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 ZNF565Q8N9K5 539 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 MRGPRDQ8TDS7 321 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 TBX15Q96SF7 602 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 CMSS1Q9BQ75 279 aaKnown RBP17.31■□□□□ 0.36
CACNB3-210ENST00000548874 MMP27Q9H306 513 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 LINC00574Q9H8X3 128 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 UNKLQ9H9P5 680 aaKnown RBP17.31■□□□□ 0.36
CACNB3-210ENST00000548874 C12orf4Q9NQ89 552 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 TMEM160Q9NX00 188 aa17.31■□□□□ 0.36
CACNB3-210ENST00000548874 ELF5Q9UKW6 265 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-210ENST00000548874 ZNF729A6NN14 1252 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-210ENST00000548874 RGS5O15539 181 aa17.3■□□□□ 0.36
CACNB3-210ENST00000548874 MELTFP08582 738 aa17.3■□□□□ 0.36
CACNB3-210ENST00000548874 PNLIPRP3Q17RR3 467 aa17.3■□□□□ 0.36
CACNB3-210ENST00000548874 C17orf58Q2M2W7 97 aa17.3■□□□□ 0.36
CACNB3-210ENST00000548874 HACD4Q5VWC8 232 aa17.3■□□□□ 0.36
CACNB3-210ENST00000548874 IZUMO1Q8IYV9 350 aa17.3■□□□□ 0.36
CACNB3-210ENST00000548874 CCDC107Q8WV48 283 aa17.3■□□□□ 0.36
CACNB3-210ENST00000548874 UPRTQ96BW1 309 aa17.3■□□□□ 0.36
CACNB3-210ENST00000548874 C6orf62Q9GZU0 229 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-210ENST00000548874 GAL3ST2Q9H3Q3 398 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms