RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 GINS3Q9BRX5 216 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 FAM212BQ9NTI7 297 aaPredicted RBP13.23□□□□□ -0.29
BRF1-212ENST00000547562 PRRC2CQ9Y520 2896 aaKnown RBP13.23□□□□□ -0.29
BRF1-212ENST00000547562 J3QT63 122 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 TOR1AO14656 332 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 SEC11BP0C7V7 166 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 ZNF14P17017 642 aaPredicted RBP13.23□□□□□ -0.29
BRF1-212ENST00000547562 PMP22Q01453 160 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 SWI5Q1ZZU3 235 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 PCSK4Q6UW60 755 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 MYPOPQ86VE0 399 aaPredicted RBP13.23□□□□□ -0.29
BRF1-212ENST00000547562 LYPD6BQ8NI32 183 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 SPIN2AQ99865 258 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 SPIN2BQ9BPZ2 258 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 IFT22Q9H7X7 185 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 CCL28Q9NRJ3 127 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 PURGQ9UJV8 347 aaKnown RBP13.23□□□□□ -0.29
BRF1-212ENST00000547562 CACNA1HO95180 2353 aa13.23□□□□□ -0.29
BRF1-212ENST00000547562 C3orf80F5H4A9 247 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 J3QW42 95 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 HSD17B6O14756 317 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 NHLH2Q02577 135 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 P4HA3Q7Z4N8 544 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 GPHA2Q96T91 129 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 ADAT1Q9BUB4 502 aaKnown RBP13.22□□□□□ -0.29
BRF1-212ENST00000547562 C11orf1Q9H5F2 150 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 DLL3Q9NYJ7 618 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 RNASEK-C17orf49H0YIS7 233 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 CD5P06127 495 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 CELA3BP08861 270 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 SPP1P10451 314 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 UCP1P25874 307 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 NKX2-1P43699 371 aaPredicted RBP13.22□□□□□ -0.29
BRF1-212ENST00000547562 ID4P47928 161 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 ZNF880Q6PDB4 577 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 CMTM1Q8IZ96 169 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 LILRB1Q8NHL6 650 aaPredicted RBP13.22□□□□□ -0.29
BRF1-212ENST00000547562 BOD1Q96IK1 185 aa13.22□□□□□ -0.29
BRF1-212ENST00000547562 DUXBA0A1W2PPF3 345 aa13.21□□□□□ -0.29
BRF1-212ENST00000547562 SNAPINO95295 136 aa13.21□□□□□ -0.29
BRF1-212ENST00000547562 CD82P27701 267 aa13.21□□□□□ -0.29
BRF1-212ENST00000547562 IGFBP7Q16270 282 aa13.21□□□□□ -0.29
BRF1-212ENST00000547562 RTL8AQ9BWD3 113 aa13.21□□□□□ -0.29
BRF1-212ENST00000547562 AGPAT2O15120 278 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 SMPD2O60906 423 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 F12P00748 615 aaPredicted RBP13.21□□□□□ -0.3
BRF1-212ENST00000547562 OR8U9P0C7N5 309 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 DANCRP0C864 163 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 ZNF44P15621 663 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 CTRB1P17538 263 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 HLA-DRB3P79483 266 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 EWSR1Q01844 656 aaKnown RBP eCLIP13.21□□□□□ -0.3
BRF1-212ENST00000547562 TGFBR3Q03167 851 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 MRPL49Q13405 166 aaKnown RBP13.21□□□□□ -0.3
BRF1-212ENST00000547562 CTRB2Q6GPI1 263 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 OR2C3Q8N628 320 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 SUMF1Q8NBK3 374 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 OR8U1Q8NH10 309 aa13.21□□□□□ -0.3
BRF1-212ENST00000547562 CLEC18AA5D8T8 446 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 DEGS1O15121 323 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 ADAM20O43506 726 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 IGHV1-2P23083 117 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 PPP1CBP62140 327 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 NMSQ5H8A3 153 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 FAM76BQ5HYJ3 339 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 ZNF324BQ6AW86 544 aaPredicted RBP13.2□□□□□ -0.3
BRF1-212ENST00000547562 Q6P435 159 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 TMEM88Q6PEY1 159 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 WDR86Q86TI4 376 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 CLEC18CQ8NCF0 446 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 OR10J5Q8NHC4 309 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 ABHD14BQ96IU4 210 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 OR2J1Q9GZK6 312 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 PARP12Q9H0J9 701 aaKnown RBP13.2□□□□□ -0.3
BRF1-212ENST00000547562 GLRX2Q9NS18 164 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 CLCF1Q9UBD9 225 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 OR2W1Q9Y3N9 320 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 A0A1W2PR80 420 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 LRP5LA4QPB2 252 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 CDRT15L2A8MXV6 281 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 H0Y980 276 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 PGLYRP1O75594 196 aaPredicted RBP13.2□□□□□ -0.3
BRF1-212ENST00000547562 SFTA3P0C7M3 94 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 PVALBP20472 110 aaPredicted RBP13.2□□□□□ -0.3
BRF1-212ENST00000547562 VDAC1P21796 283 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 CD80P33681 288 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 DVL1P1P54792 670 aaPredicted RBP13.2□□□□□ -0.3
BRF1-212ENST00000547562 UBE2NP61088 152 aaKnown RBP13.2□□□□□ -0.3
BRF1-212ENST00000547562 POLR2GP62487 172 aaKnown RBP eCLIP13.2□□□□□ -0.3
BRF1-212ENST00000547562 H1FOOQ8IZA3 346 aaPredicted RBP13.2□□□□□ -0.3
BRF1-212ENST00000547562 OR5D13Q8NGL4 314 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 KIRREL1Q96J84 757 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 CABLES2Q9BTV7 478 aa13.2□□□□□ -0.3
BRF1-212ENST00000547562 NKX2-8O15522 239 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 TNFSF12O43508 249 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 IGHG3P01860 377 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 IDH3GP51553 393 aaPredicted RBP13.19□□□□□ -0.3
BRF1-212ENST00000547562 FAM122CQ6P4D5 195 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 GCNT2Q8N0V5 402 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms