RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 COMMD3Q9UBI1 195 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 OPN4Q9UHM6 478 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 DPPA5A6NC42 116 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 TOX4O94842 621 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 AVPP01185 164 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 ZNF728P0DKX0 622 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 CCL3L1P16619 93 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 FAM120AOSQ5T036 256 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 C1orf122Q6ZSJ8 110 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 SAMD12Q8N8I0 201 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 ZNF565Q8N9K5 539 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 CORO2AQ92828 525 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 PHF21AQ96BD5 680 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 ZNF714Q96N38 554 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 PECRQ9BY49 303 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 SIRPDQ9H106 197 aa19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 UBE2J1Q9Y385 318 aaPredicted RBP19.06■□□□□ 0.64
SMARCD1-203ENST00000547247 MT-ND4P03905 459 aa19.05■□□□□ 0.64
SMARCD1-203ENST00000547247 MMP9P14780 707 aa19.05■□□□□ 0.64
SMARCD1-203ENST00000547247 PLAC9Q5JTB6 97 aa19.05■□□□□ 0.64
SMARCD1-203ENST00000547247 MZT2AQ6P582 158 aa19.05■□□□□ 0.64
SMARCD1-203ENST00000547247 C1orf229Q6ZS94 237 aaPredicted RBP19.05■□□□□ 0.64
SMARCD1-203ENST00000547247 CYYR1Q96J86 154 aa19.05■□□□□ 0.64
SMARCD1-203ENST00000547247 PCGF1Q9BSM1 259 aa19.05■□□□□ 0.64
SMARCD1-203ENST00000547247 CCDC59Q9P031 241 aaKnown RBP19.05■□□□□ 0.64
SMARCD1-203ENST00000547247 hCG_1809904A0A1W2PP81 198 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 A0A1W2PPE2 198 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 A0A1W2PR64 198 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 A0A1W2PRV1 198 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 HNF1AP20823 631 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 UBE2NLQ5JXB2 153 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 RTN4RL2Q86UN3 420 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 GAPTQ8N292 157 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 Q8N7P7 452 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 DYRK2Q92630 601 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 ABCG5Q9H222 651 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 TAS2R3Q9NYW6 316 aa19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 SONP18583 2426 aaKnown RBP19.04■□□□□ 0.64
SMARCD1-203ENST00000547247 HIST1H1DP16402 221 aaKnown RBP19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 GLP1RP43220 463 aa19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 DLX6P56179 175 aa19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 ARL6IP1Q15041 203 aa19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 TEX29Q8N6K0 151 aa19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 OR13A1Q8NGR1 328 aa19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 UPRTQ96BW1 309 aa19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 DGCR14Q96DF8 476 aaKnown RBP19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 GAL3ST2Q9H3Q3 398 aa19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 METTL8Q9H825 291 aaKnown RBP19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 KIAA2026Q5HYC2 2103 aa19.03■□□□□ 0.64
SMARCD1-203ENST00000547247 C17orf98A8MV24 154 aa19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 VMO1Q7Z5L0 202 aa19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 C11orf42Q8N5U0 333 aa19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 OR4K15Q8NH41 348 aa19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 S100A16Q96FQ6 103 aaKnown RBP19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 CMTM3Q96MX0 182 aa19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 TBX15Q96SF7 602 aa19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 DIABLOQ9NR28 239 aa19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 TRAPPC2LQ9UL33 140 aa19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 KCNK7Q9Y2U2 307 aa19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 SVEP1Q4LDE5 3571 aa19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 NSD1Q96L73 2696 aaPredicted RBP19.02■□□□□ 0.64
SMARCD1-203ENST00000547247 A0A075B6Q4 140 aa19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 A0A0A6YYH2 397 aa19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 A6NJ64 397 aa19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 ZNF729A6NN14 1252 aaPredicted RBP19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 INAFM1C9JVW0 142 aa19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 RBP4P02753 201 aa19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 GNB3P16520 340 aa19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 MRGPRDQ8TDS7 321 aa19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 CCDC107Q8WV48 283 aa19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 SIRT7Q9NRC8 400 aa19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 AK3Q9UIJ7 227 aa19.02■□□□□ 0.63
SMARCD1-203ENST00000547247 ANK3Q12955 4377 aaKnown RBP19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 TRAV39A0A0B4J263 110 aa19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 SERPINE3A8MV23 424 aa19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 MFNGO00587 321 aa19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 GZMHP20718 246 aa19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 PRTN3P24158 256 aa19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 NANPQ8TBE9 248 aa19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 CMSS1Q9BQ75 279 aaKnown RBP19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 RIMS4Q9H426 269 aaPredicted RBP19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 UNKLQ9H9P5 680 aaKnown RBP19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 ZMAT3Q9HA38 289 aaKnown RBP19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 CDC42EP3Q9UKI2 254 aa19.01■□□□□ 0.63
SMARCD1-203ENST00000547247 APOA1P02647 267 aa19■□□□□ 0.63
SMARCD1-203ENST00000547247 CGB3P0DN86 165 aa19■□□□□ 0.63
SMARCD1-203ENST00000547247 CGB7P0DN87 165 aa19■□□□□ 0.63
SMARCD1-203ENST00000547247 MRPS15P82914 257 aaKnown RBP19■□□□□ 0.63
SMARCD1-203ENST00000547247 CDNFQ49AH0 187 aa19■□□□□ 0.63
SMARCD1-203ENST00000547247 OLFML2AQ68BL7 652 aa19■□□□□ 0.63
SMARCD1-203ENST00000547247 IL17RELQ6ZVW7 336 aa19■□□□□ 0.63
SMARCD1-203ENST00000547247 MRPL30Q8TCC3 161 aaKnown RBP19■□□□□ 0.63
SMARCD1-203ENST00000547247 BEX2Q9BXY8 128 aa19■□□□□ 0.63
SMARCD1-203ENST00000547247 CHMP1AQ9HD42 196 aaPredicted RBP19■□□□□ 0.63
SMARCD1-203ENST00000547247 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19■□□□□ 0.63
SMARCD1-203ENST00000547247 KBTBD11-OT1A0A1B0GTJ5 212 aa18.99■□□□□ 0.63
SMARCD1-203ENST00000547247 HPGDSO60760 199 aa18.99■□□□□ 0.63
SMARCD1-203ENST00000547247 NAPSAO96009 420 aa18.99■□□□□ 0.63
SMARCD1-203ENST00000547247 CD3GP09693 182 aa18.99■□□□□ 0.63
SMARCD1-203ENST00000547247 CDK2P24941 298 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms