RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 CEBPDP49716 269 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 KLF3P57682 345 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 ZNF345Q14585 488 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 LRRC37A5PQ49AS3 106 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 LDLRAD3Q86YD5 345 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 KCNRGQ8N5I3 272 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 OR10Z1Q8NGY1 313 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 ARL6Q9H0F7 186 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 METTL8Q9H825 291 aaKnown RBP12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 MBNL3Q9NUK0 354 aaKnown RBP12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 MBD2Q9UBB5 411 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 DUSP13Q9UII6 198 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 SH3BGRL2Q9UJC5 107 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 ZGRF1Q86YA3 2104 aa12.85□□□□□ -0.35
CALCOCO1-203ENST00000546443 IGKV1D-13A0A0B4J2D9 117 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 OR2F2O95006 317 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 HOXB5P09067 269 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 IGKV1-13P0DP09 117 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 CFHR2P36980 270 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 RPS23P62266 143 aaKnown RBP12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 OR2F1Q13607 317 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 HMGN3Q15651 99 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 LIAT1Q6ZQX7 453 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 H1FOOQ8IZA3 346 aaPredicted RBP12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 FAM185AQ8N0U4 392 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 OR2Z1Q8NG97 314 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 THAP6Q8TBB0 222 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 MRPL24Q96A35 216 aaKnown RBP12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 MSI2Q96DH6 328 aaKnown RBP12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 GLS2Q9UI32 602 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 CFAP47Q6ZTR5 3102 aa12.84□□□□□ -0.35
CALCOCO1-203ENST00000546443 H0YIZ8 118 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 PSPNO60542 156 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 RP2O75695 350 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 THBDP07204 575 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 S100A1P23297 94 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 HOXA4Q00056 320 aaPredicted RBP12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 SP6Q3SY56 376 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 GGNBP1Q5YKI7 109 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 NUP37Q8NFH4 326 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 GLYATL2Q8WU03 294 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 LRRC29Q8WV35 223 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 C18orf12Q96KH6 178 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 VKORC1Q9BQB6 163 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 SLC5A7Q9GZV3 580 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 SEBOXQ9HB31 216 aaPredicted RBP12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 TAAR3PQ9P1P4 343 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 OR14J1Q9UGF5 321 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 UBQLN2Q9UHD9 624 aa12.83□□□□□ -0.35
CALCOCO1-203ENST00000546443 SHANK1Q9Y566 2161 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 CUL9Q8IWT3 2517 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 TRAV39A0A0B4J263 110 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 RPS10-NUDT3A0A1W2PQS6 291 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 IFNL4K9M1U5 179 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 GPR31O00270 319 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 MPPED1O15442 326 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 ATXN7L3Q14CW9 347 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 SPRNQ5BIV9 151 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 SLC35E4Q6ICL7 350 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 VHLLQ6RSH7 139 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 ACOT7LQ6ZUV0 252 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 RND1Q92730 232 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 MEGF10Q96KG7 1140 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 VRK1Q99986 396 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 MRPL37Q9BZE1 423 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 MAB21L2Q9Y586 359 aa12.83□□□□□ -0.36
CALCOCO1-203ENST00000546443 TMEM30CPA0ZSE6 113 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 DPRXA6NFQ7 191 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 SRRM5B3KS81 715 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 B3GALNT1O75752 331 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 EGR1P18146 543 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 KLRB1Q12918 225 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 SMIM21Q3B7S5 101 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 CLLU1Q5K131 121 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 PRSS54Q6PEW0 395 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 ZNF818PQ6ZRF7 136 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 SSX8Q7RTT4 187 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 SLC51BQ86UW2 128 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 LGI3Q8N145 548 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 ZNF565Q8N9K5 539 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 SECTM1Q8WVN6 248 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 KIRREL1Q96J84 757 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 TP53RKQ96S44 253 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 CCL28Q9NRJ3 127 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 TRAPPC2LQ9UL33 140 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 OR2W1Q9Y3N9 320 aa12.82□□□□□ -0.36
CALCOCO1-203ENST00000546443 C3orf85A0A1B0GTC6 90 aa12.81□□□□□ -0.36
CALCOCO1-203ENST00000546443 hCG_1807616A0A1W2PRN6 198 aa12.81□□□□□ -0.36
CALCOCO1-203ENST00000546443 LINC00862A6NCI5 91 aa12.81□□□□□ -0.36
CALCOCO1-203ENST00000546443 IFNA21P01568 189 aa12.81□□□□□ -0.36
CALCOCO1-203ENST00000546443 PTAFRP25105 342 aa12.81□□□□□ -0.36
CALCOCO1-203ENST00000546443 OR3A1P47881 315 aa12.81□□□□□ -0.36
CALCOCO1-203ENST00000546443 AP2S1P53680 142 aaPredicted RBP12.81□□□□□ -0.36
CALCOCO1-203ENST00000546443 RAB32Q13637 225 aa12.81□□□□□ -0.36
CALCOCO1-203ENST00000546443 IAH1Q2TAA2 248 aaPredicted RBP12.81□□□□□ -0.36
CALCOCO1-203ENST00000546443 TMEM108Q6UXF1 575 aa12.81□□□□□ -0.36
CALCOCO1-203ENST00000546443 TBC1D26Q86UD7 250 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms