RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TBPP20226 339 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST1H2BOP23527 126 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST1H2BBP33778 126 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 P2RY1P47900 373 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST1H2BDP58876 126 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST1H2BCP62807 126 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST2H2BEQ16778 126 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.67□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF385CQ66K41 422 aaPredicted RBP12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST1H2BHQ93079 126 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 FAM210BQ96KR6 192 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST1H2BNQ99877 126 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST1H2BMQ99879 126 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 RARRES3Q9UL19 164 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 IGKV3D-11A0A0A0MRZ8 115 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 SERPINE3A8MV23 424 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 PROB1E7EW31 1015 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 ZFAND5O76080 213 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 HLA-GP17693 338 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 CHRNA7P36544 502 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 WIPI1Q5MNZ9 446 aaPredicted RBP12.66□□□□□ -0.38
HOXC11-202ENST00000546378 LIAT1Q6ZQX7 453 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 MCEMP1Q8IX19 187 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 MRPL41Q8IXM3 137 aaKnown RBP12.66□□□□□ -0.38
HOXC11-202ENST00000546378 IGKV1D-13A0A0B4J2D9 117 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 ARGFXA6NJG6 315 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 PPYP01298 95 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 IGKV1-13P0DP09 117 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 CD200P41217 278 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 OSR2Q8N2R0 312 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 TMEM252Q8N6L7 170 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 ST8SIA1Q92185 356 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 PACRGQ96M98 296 aaPredicted RBP12.66□□□□□ -0.38
HOXC11-202ENST00000546378 ERRFI1Q9UJM3 462 aaPredicted RBP12.66□□□□□ -0.38
HOXC11-202ENST00000546378 UBE2L5PA0A1B0GUS4 154 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 IFITM10A6NMD0 228 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 IFNA5P01569 189 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 CRYAAP02489 173 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 TK1P04183 234 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 CCL4P13236 92 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 AGAP20933 346 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 MPLP40238 635 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 TMEM187Q14656 261 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 DEGS2Q6QHC5 323 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF818PQ6ZRF7 136 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 GATAD1Q8WUU5 269 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 EXTL1Q92935 676 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 OXGR1Q96P68 337 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 PRRG4Q9BZD6 226 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 UCK1Q9HA47 277 aa12.66□□□□□ -0.38
HOXC11-202ENST00000546378 TRBV6-7A0A0A0MS04 114 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 HSPB2A8KAH6 182 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 SCGB1D1O95968 90 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 CTSDP07339 412 aaPredicted RBP12.65□□□□□ -0.38
HOXC11-202ENST00000546378 CLN3Q13286 438 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 HSPB2Q16082 182 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 SSX2Q16385 188 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 ZDHHC23Q8IYP9 409 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 D2HGDHQ8N465 521 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 IL22RA1Q8N6P7 574 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 ASB13Q8WXK3 278 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 PLEKHA2Q9HB19 425 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 MYOZ1Q9NP98 299 aaPredicted RBP12.65□□□□□ -0.38
HOXC11-202ENST00000546378 MGAQ8IWI9 3026 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 A0A0G2JMM0 328 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 IGHV5-10-1A0A0J9YXX1 117 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 A0A1W2PPB8 328 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 A0A1W2PRS3 328 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 C5orf49A4QMS7 147 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 KIR3DP1A8MWS1 328 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 BCL3P20749 454 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 LINC00205P59089 165 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF787Q6DD87 383 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 DPPA2Q7Z7J5 298 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 LHFPL1Q86WI0 220 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF501Q96CX3 271 aaPredicted RBP12.65□□□□□ -0.38
HOXC11-202ENST00000546378 C12orf49Q9H741 205 aa12.65□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF705FA8MVS1 300 aaPredicted RBP12.64□□□□□ -0.39
HOXC11-202ENST00000546378 TMEM50AO95807 157 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 ZNF705DP0CH99 300 aaPredicted RBP12.64□□□□□ -0.39
HOXC11-202ENST00000546378 ZNF705BP0CI00 300 aaPredicted RBP12.64□□□□□ -0.39
HOXC11-202ENST00000546378 THBS4P35443 961 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 FAM3BP58499 235 aaPredicted RBP12.64□□□□□ -0.39
HOXC11-202ENST00000546378 ZNF66Q6ZN08 573 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 AAED1Q7RTV5 226 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 TCEAL7Q9BRU2 100 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 ELOVL1Q9BW60 279 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 MRPL13Q9BYD1 178 aaKnown RBP12.64□□□□□ -0.39
HOXC11-202ENST00000546378 METTL1Q9UBP6 276 aaKnown RBP12.64□□□□□ -0.39
HOXC11-202ENST00000546378 PLCE1Q9P212 2302 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 PGPEP1LA6NFU8 196 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 CLDN1O95832 211 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 KRASP01116 189 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 PNLIPRP3Q17RR3 467 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 OR56B2PQ8NGI1 322 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 PTX4Q96A99 478 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 A0A0J9YW62 118 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 BLACEA4D250 179 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 SIRPB1O00241 398 aa12.64□□□□□ -0.39
HOXC11-202ENST00000546378 MPPED1O15442 326 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms