RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 OR2V1Q8NHB1 315 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 TPSD1Q9BZJ3 242 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 SRD5A3Q9H8P0 318 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 GAB2Q9UQC2 676 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 A0A1W2PR77 199 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 EPOPA6NHQ4 379 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 H3BP45 60 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 HLA-HP01893 362 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 CEACAM6P40199 344 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 FUT6P51993 359 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 HNRNPKP61978 463 aaKnown RBP eCLIP12.22□□□□□ -0.45
SRP54-202ENST00000546080 DLX2Q07687 328 aaPredicted RBP12.22□□□□□ -0.45
SRP54-202ENST00000546080 TMEM267Q0VDI3 215 aaPredicted RBP12.22□□□□□ -0.45
SRP54-202ENST00000546080 PRAMEF20Q5VT98 475 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 TGIF2LXQ8IUE1 241 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 ZNF664Q8N3J9 261 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 FADS6Q8N9I5 356 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 SCGB1C1Q8TD33 95 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 CA5BP1Q8WTZ4 195 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 RAB24Q969Q5 203 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 P2RX4Q99571 388 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 RSG1Q9BU20 258 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 NDUFAF3Q9BU61 184 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 ACTR3CQ9C0K3 210 aaPredicted RBP12.22□□□□□ -0.45
SRP54-202ENST00000546080 RPRMQ9NS64 109 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 P4HTMQ9NXG6 502 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 NCOA6Q14686 2063 aaPredicted RBP12.22□□□□□ -0.45
SRP54-202ENST00000546080 SZT2Q5T011 3432 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 SNRPCP09234 159 aaKnown RBP12.22□□□□□ -0.45
SRP54-202ENST00000546080 FGF8P55075 233 aaPredicted RBP12.22□□□□□ -0.45
SRP54-202ENST00000546080 RPS18P62269 152 aaKnown RBP12.22□□□□□ -0.45
SRP54-202ENST00000546080 MRPS34P82930 218 aaKnown RBP12.22□□□□□ -0.45
SRP54-202ENST00000546080 CLN3Q13286 438 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 PLCXD3Q63HM9 321 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 TMEM42Q69YG0 159 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 TCEAL6Q6IPX3 200 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 RHBDD2Q6NTF9 364 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 ZNF774Q6NX45 483 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 BATF2Q8N1L9 274 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 RNF115Q9Y4L5 304 aa12.22□□□□□ -0.45
SRP54-202ENST00000546080 IGLV3-12A0A075B6K2 115 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 CEBPZOSA8MTT3 80 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 ZNF705GA8MUZ8 300 aaPredicted RBP12.21□□□□□ -0.45
SRP54-202ENST00000546080 TCAPO15273 167 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 SYNGR3O43761 229 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 NPBWR2P48146 333 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 COL10A1Q03692 680 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 FAM27BQ5VT28 67 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 BEND4Q6ZU67 534 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 EXTL1Q92935 676 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 SPACA9Q96E40 222 aaPredicted RBP12.21□□□□□ -0.45
SRP54-202ENST00000546080 ZNF837Q96EG3 531 aaPredicted RBP12.21□□□□□ -0.45
SRP54-202ENST00000546080 UCN2Q96RP3 112 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 TAAR3PQ9P1P4 343 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 VAX2Q9UIW0 290 aa12.21□□□□□ -0.45
SRP54-202ENST00000546080 TNRC18O15417 2968 aaPredicted RBP12.2□□□□□ -0.46
SRP54-202ENST00000546080 VAMP5O95183 116 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 IFNA1P01562 189 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 CD27P26842 260 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 ADIRFQ15847 76 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 NKAIN1Q4KMZ8 207 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 FAM180AQ6UWF9 173 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 C7orf61Q8IZ16 206 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 OR5D13Q8NGL4 314 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 OR1F12Q8NHA8 337 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 PIGCQ92535 297 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 VSIRQ9H7M9 311 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 Q9N2K0 584 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 RNF150Q9ULK6 438 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 IGHV1OR15-9A0A0B4J2B8 117 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 IGKV1D-13A0A0B4J2D9 117 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 XKRY2A2RUG3 117 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 SLC22A20A6NK97 555 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 H0Y980 276 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 TNFSF12O43508 249 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 CYTIPO60759 359 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 IGKV1-13P0DP09 117 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 TUBG1P23258 451 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 ZNF726P1Q15940 193 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 NCR3LG1Q68D85 454 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 C16orf82Q7Z2V1 217 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 C5orf24Q7Z6I8 188 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 KMT5CQ86Y97 462 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 BEND2Q8NDZ0 799 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 MBD3L1Q8WWY6 194 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 IL22RA2Q969J5 263 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 POM121Q96HA1 1249 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 RASL10BQ96S79 203 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 NEU1Q99519 415 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 DDA1Q9BW61 102 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 CCL28Q9NRJ3 127 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 CLEC1BQ9P126 229 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 SEMA5BQ9P283 1151 aa12.2□□□□□ -0.46
SRP54-202ENST00000546080 GCGP01275 180 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 SCTP09683 121 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 Q6ZS49 121 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 RABEPKQ7Z6M1 372 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 MRGPRGQ86SM5 289 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 ZNF611Q8N823 705 aa12.19□□□□□ -0.46
SRP54-202ENST00000546080 NECAP1Q8NC96 275 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms