RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 GAPTQ8N292 157 aa7.53□□□□□ -1.2
TDP1-204ENST00000545686 M1APQ8TC57 530 aa7.53□□□□□ -1.2
TDP1-204ENST00000545686 KCNE4Q8WWG9 221 aa7.53□□□□□ -1.2
TDP1-204ENST00000545686 GFOD1Q9NXC2 390 aa7.53□□□□□ -1.2
TDP1-204ENST00000545686 CISD1Q9NZ45 108 aaKnown RBP7.53□□□□□ -1.2
TDP1-204ENST00000545686 RNF115Q9Y4L5 304 aa7.53□□□□□ -1.2
TDP1-204ENST00000545686 IGHV1-45A0A0A0MS14 117 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 TGIF2-C20orf24A0A0A6YYL0 155 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 IGHV5-10-1A0A0J9YXX1 117 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 SLC22A20A6NK97 555 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 CYB5BO43169 146 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 CBR3O75828 277 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 CST7O76096 145 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 TMEM50AO95807 157 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 S100GP29377 79 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 NOVA1P51513 510 aaKnown RBP7.52□□□□□ -1.21
TDP1-204ENST00000545686 SSR4P51571 173 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 MPV17LQ2QL34 196 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 ZNF383Q8NA42 475 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 GTF3AQ92664 365 aaKnown RBP7.52□□□□□ -1.21
TDP1-204ENST00000545686 RCC1LQ96I51 464 aaKnown RBP7.52□□□□□ -1.21
TDP1-204ENST00000545686 IMMP1LQ96LU5 166 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 RAB40CQ96S21 281 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 P2RX4Q99571 388 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 DUSP23Q9BVJ7 150 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 PRDM14Q9GZV8 571 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 MAGT1Q9H0U3 335 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 WNT5BQ9H1J7 359 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 RFNGQ9Y644 331 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 A0A1B0GU03 582 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 ZNF716A6NP11 495 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 CYB5R3P00387 301 aaPredicted RBP7.52□□□□□ -1.21
TDP1-204ENST00000545686 IFNA5P01569 189 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 B4GALT1P15291 398 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 EPHA1P21709 976 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 CD200P41217 278 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 HAAOP46952 286 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 FGF12P61328 243 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 RUNX1Q01196 453 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 NRN1LQ496H8 165 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 ABLIM2Q6H8Q1 611 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 SPNS3Q6ZMD2 512 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 SLC25A26Q70HW3 274 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 CALHM1Q8IU99 346 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 PIGCQ92535 297 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 FOXB1Q99853 325 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 PSMG3Q9BT73 122 aaPredicted RBP7.52□□□□□ -1.21
TDP1-204ENST00000545686 C1QTNF5Q9BXJ0 243 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 PRDM13Q9H4Q3 707 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 P4HTMQ9NXG6 502 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 HS3ST3B1Q9Y662 390 aa7.52□□□□□ -1.21
TDP1-204ENST00000545686 TRBV24-1A0A075B6N3 115 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 A0A1W2PQM1 296 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 OR5H1A6NKK0 313 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 CLDN34H7C241 214 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 CHST1O43916 411 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 IFNA10P01566 189 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 BCL2P10415 239 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 SRD5A2P31213 254 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 CEBPGP53567 150 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 PAX9P55771 341 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 ZNF154Q13106 437 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 FAM90A2PQ658T7 463 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 AAED1Q7RTV5 226 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 LINC00596Q86U02 117 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 TMEM217Q8N7C4 229 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 NAXEQ8NCW5 288 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 OR10D4PQ8NGN7 298 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 OR2V1Q8NHB1 315 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 MBD3L1Q8WWY6 194 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 FAM210BQ96KR6 192 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 CCDC74BQ96LY2 380 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 CTDSP1Q9GZU7 261 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 RIMS4Q9H426 269 aaPredicted RBP7.51□□□□□ -1.21
TDP1-204ENST00000545686 CALHM2Q9HA72 323 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 TAAR3PQ9P1P4 343 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 MRPS17Q9Y2R5 130 aaKnown RBP7.51□□□□□ -1.21
TDP1-204ENST00000545686 ATP23Q9Y6H3 246 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 TRIOO75962 3097 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 TRBV6-6A0A0A6YYG2 114 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 IGKV1D-13A0A0B4J2D9 117 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 LRP5LA4QPB2 252 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 TRGC2P03986 189 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 IGKV1-13P0DP09 117 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 FGF5P12034 268 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 COX6A1P12074 109 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 EDN3P14138 238 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 B3GALT5-AS1P59052 145 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 SSTP61278 116 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 PMS2P11Q13670 270 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 C9orf152Q5JTZ5 239 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 GUSBP11Q6P575 273 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 COLCA1Q6ZS62 124 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 ALKBH3Q96Q83 286 aaPredicted RBP7.51□□□□□ -1.21
TDP1-204ENST00000545686 URGCP-MRPS24S4R325 110 aa7.51□□□□□ -1.21
TDP1-204ENST00000545686 CHD3Q12873 2000 aaKnown RBP7.51□□□□□ -1.21
TDP1-204ENST00000545686 OPN1MWP04001 364 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 SOD3P08294 240 aa7.5□□□□□ -1.21
TDP1-204ENST00000545686 MMP7P09237 267 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms