RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 MED22Q15528 200 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 FAM189A2Q15884 450 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 SSX2Q16385 188 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 SLC22A6Q4U2R8 563 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 PRAMEF5Q5TYX0 476 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 GLT8D1Q68CQ7 371 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 AWAT2Q6E213 333 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 SLC35E4Q6ICL7 350 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 CCDC144NLQ6NUI1 221 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 BRICD5Q6PL45 260 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 IZUMO2Q6UXV1 221 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 LHFPL4Q7Z7J7 247 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 SUMF2Q8NBJ7 301 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 OR10K1Q8NGX5 313 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 DUSP21Q9H596 190 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 LINC00574Q9H8X3 128 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 TCF7L1Q9HCS4 588 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 DPM3Q9P2X0 92 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 RAB26Q9ULW5 256 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 AMMECR1Q9Y4X0 333 aaPredicted RBP9.56□□□□□ -0.88
HDAC4-216ENST00000544989 KIAA2026Q5HYC2 2103 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 TMEM30CPA0ZSE6 113 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 MEX3AA1L020 520 aaKnown RBP9.55□□□□□ -0.88
HDAC4-216ENST00000544989 F2RL2O00254 374 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 HSPB6O14558 160 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 CA11O75493 328 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 IL1AP01583 271 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 GLAP06280 429 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 BRS3P32247 399 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 KIR2DS4P43632 304 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 PROK1P58294 105 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 IRF3Q14653 427 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 LY6EQ16553 131 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 ACSM3Q53FZ2 586 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 RBM48Q5RL73 367 aaKnown RBP9.55□□□□□ -0.88
HDAC4-216ENST00000544989 RSBN1Q5VWQ0 802 aaPredicted RBP9.55□□□□□ -0.88
HDAC4-216ENST00000544989 GLIPR1L1Q6UWM5 242 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 UNQ9370/PRO34162Q6UXP9 181 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 PRSS48Q7RTY5 328 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 C16orf82Q7Z2V1 217 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 OR4P4Q8NGL7 312 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 OR2T6Q8NHC8 308 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 MUL1Q969V5 352 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 AKR1E2Q96JD6 320 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 CITED1Q99966 193 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 CST11Q9H112 138 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 CALYQ9NYX4 217 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 KIF25Q9UIL4 384 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 TCF19Q9Y242 345 aa9.55□□□□□ -0.88
HDAC4-216ENST00000544989 LSM2Q9Y333 95 aaKnown RBP9.55□□□□□ -0.88
HDAC4-216ENST00000544989 A0A1W2PPK0 400 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 MCRIP1C9JLW8 97 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 M0QZ24 198 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 GEMIN2O14893 280 aaKnown RBP9.54□□□□□ -0.88
HDAC4-216ENST00000544989 IGLV1-47P01700 117 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 CGB3P0DN86 165 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 CGB7P0DN87 165 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 CRHBPP24387 322 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 MNDAP41218 407 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 TMEM30BQ3MIR4 351 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 ATAD3CQ5T2N8 411 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 TRAT1Q6PIZ9 186 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 OR9G1Q8NH87 305 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 PIFOQ8TCI5 191 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 NEK7Q8TDX7 302 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 CAPSLQ8WWF8 208 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 ORAI1Q96D31 301 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 TMED9Q9BVK6 235 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 PPIL3Q9H2H8 161 aaKnown RBP9.54□□□□□ -0.88
HDAC4-216ENST00000544989 Q9H521 79 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 ING3Q9NXR8 418 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 IDI2-AS1Q9NZ38 188 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 VWFP04275 2813 aa9.54□□□□□ -0.88
HDAC4-216ENST00000544989 MAGEA13PA6NCF6 341 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 A6NDX4 124 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 NPIPB11E5RHQ5 1161 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 PIN1P1O15428 100 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 MRPS14O60783 128 aaKnown RBP9.53□□□□□ -0.88
HDAC4-216ENST00000544989 CRTAPO75718 401 aaPredicted RBP9.53□□□□□ -0.88
HDAC4-216ENST00000544989 MMP23AO75900 390 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 ARL6IP5O75915 188 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 SRMP19623 302 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 NFYBP25208 207 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 VHLP40337 213 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 MLLT11Q13015 90 aaPredicted RBP9.53□□□□□ -0.88
HDAC4-216ENST00000544989 TPBGQ13641 420 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 C17orf58Q2M2W7 97 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 HLA-DRB5Q30154 266 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 Q3ZCU0 254 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 HSD17B12Q53GQ0 312 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 CEACAM19Q7Z692 300 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 DYNAPQ8N1N2 210 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 OR52M1Q8NGK5 317 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 OR13A1Q8NGR1 328 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 TAF15Q92804 592 aaKnown RBP eCLIP9.53□□□□□ -0.881e-6■□□□□ 11.1
HDAC4-216ENST00000544989 KIRREL1Q96J84 757 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 OR5M11Q96RB7 305 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 CCDC90BQ9GZT6 254 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 MMP28Q9H239 520 aa9.53□□□□□ -0.88
HDAC4-216ENST00000544989 RCC2Q9P258 522 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms