RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 AK3Q9UIJ7 227 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 KCNK7Q9Y2U2 307 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 RBMX2Q9Y388 322 aaKnown RBP7.94□□□□□ -1.14
YBX3-215ENST00000544504 CACNG2Q9Y698 323 aa7.94□□□□□ -1.14
YBX3-215ENST00000544504 SONP18583 2426 aaKnown RBP7.94□□□□□ -1.14
YBX3-215ENST00000544504 KIR2DS1A0A191URI9 304 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 UBE2QL1A1L167 161 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 NAP1L6A6NFF2 107 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 TMPRSS2O15393 492 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 ADAM20O43506 726 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 NDUFB3O43676 98 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 ORC5O43913 435 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 ZNF737O75373 536 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 GYPAP02724 150 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 TK1P04183 234 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 NAT1P18440 290 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 GIFP27352 417 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 ERP29P30040 261 aaKnown RBP7.93□□□□□ -1.14
YBX3-215ENST00000544504 GDNFP39905 211 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 KIR2DS4P43632 304 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 KIR2DS1Q14954 304 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 GRK1Q15835 563 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 CARTPTQ16568 116 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 FAM201AQ5SY85 155 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 C6orf183Q5T699 404 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 MZT2BQ6NZ67 158 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 CLEC2AQ6UVW9 174 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 ZNF497Q6ZNH5 498 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 Q6ZS49 121 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 GDPD3Q7L5L3 318 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 HOGA1Q86XE5 327 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 TMEM229BQ8NBD8 167 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 OR5T2Q8NGG2 359 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 NUDCD2Q8WVJ2 157 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 TRIM63Q969Q1 353 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 GAFA1Q96PS6 74 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 SDHCQ99643 169 aaPredicted RBP7.93□□□□□ -1.14
YBX3-215ENST00000544504 TMEM246Q9BRR3 403 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 PPA2Q9H2U2 334 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 ZNF286AQ9HBT8 521 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 KCNIP1Q9NZI2 227 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 OR6C3Q9NZP0 311 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 KLK11Q9UBX7 282 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 ANAPC10Q9UM13 185 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 PCDHB10Q9UN67 800 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 SVEP1Q4LDE5 3571 aa7.93□□□□□ -1.14
YBX3-215ENST00000544504 A0A1W2PQ09 198 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 ANKRD20A5PA0PJZ0 165 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 MEIOCA2RUB1 952 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 ZNF736B4DX44 427 aaPredicted RBP7.92□□□□□ -1.14
YBX3-215ENST00000544504 HSPB6O14558 160 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 SSX4O60224 188 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 SSX5O60225 188 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 PSPNO60542 156 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 NAPSAO96009 420 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 IGHV4-39P01824 125 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 FCGR3AP08637 254 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 CTXN2P0C2S0 81 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 AKAIN1P0CW23 69 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 AMY2BP19961 511 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 OR3A1P47881 315 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 OR3A3P47888 321 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 CEBPDP49716 269 aaPredicted RBP7.92□□□□□ -1.14
YBX3-215ENST00000544504 NPY4RP50391 375 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 P2RX3P56373 397 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 GUCA2AQ02747 115 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 MEF2DQ14814 521 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 PDCD1Q15116 288 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 BAK1Q16611 211 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 RNASE12Q5GAN4 147 aaKnown RBP7.92□□□□□ -1.14
YBX3-215ENST00000544504 KRBOX4Q5JUW0 171 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 C17orf107Q6ZR85 190 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 TMEM17Q86X19 198 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 LYSMD2Q8IV50 215 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 GAPTQ8N292 157 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 TMEM185AQ8NFB2 350 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 BEST4Q8NFU0 473 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 OR8B3Q8NGG8 313 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 GCDHQ92947 438 aaPredicted RBP7.92□□□□□ -1.14
YBX3-215ENST00000544504 NEIL1Q96FI4 390 aaPredicted RBP7.92□□□□□ -1.14
YBX3-215ENST00000544504 OR8B2Q96RD0 313 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 CCL13Q99616 98 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 PIMREGQ9BSJ6 248 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 DCAF16Q9NXF7 216 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 SLC25A10Q9UBX3 287 aaPredicted RBP7.92□□□□□ -1.14
YBX3-215ENST00000544504 OPN4Q9UHM6 478 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 TRAPPC2LQ9UL33 140 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 MAB21L2Q9Y586 359 aa7.92□□□□□ -1.14
YBX3-215ENST00000544504 MEIKINA0A087WXM9 373 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 TRBV23-1A0A0A0MS06 115 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 A0A1W2PPH5 198 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 TMEM82A0PJX8 343 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 DISC1C4P0D8 188 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 LYNX1G3V0Z9 82 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 TNFRSF13BO14836 293 aaPredicted RBP7.91□□□□□ -1.14
YBX3-215ENST00000544504 ZNF205O95201 554 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 DIRAS3O95661 229 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 MT-ND4P03905 459 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 IFNA6P05013 189 aa7.91□□□□□ -1.14
YBX3-215ENST00000544504 LYNX1P0DP58 116 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms