RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	CNPY1	Q3B7I2	92 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	RSBN1	Q5VWQ0	802 aa	Predicted RBP	8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	SLC35E4	Q6ICL7	350 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	OR4M2	Q8NGB6	313 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	MRGPRD	Q8TDS7	321 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	COQ2	Q96H96	371 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	DIRAS2	Q96HU8	199 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	CYYR1	Q96J86	154 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	RIMS4	Q9H426	269 aa	Predicted RBP	8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	KCNIP1	Q9NZI2	227 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	EXTL2	Q9UBQ6	330 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	KCNS2	Q9ULS6	477 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	MALRD1	Q5VYJ5	2156 aa		8.39	□□□□□ -1.07
CPSF7-221	ENST00000543545	hCG_1809904	A0A1W2PP81	198 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545		A0A1W2PPE2	198 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545		A0A1W2PR64	198 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545		A0A1W2PRV1	198 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	TMEM235	A6NFC5	223 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	MFNG	O00587	321 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	GSTP1	P09211	210 aa	Known RBP	8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	CCL3L1	P16619	93 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	GATA3	P23771	443 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	TAS2R20	P59543	309 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	ZNF273	Q14593	569 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	METTL11B	Q5VVY1	283 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	OLFML2A	Q68BL7	652 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	CNIH2	Q6PI25	160 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	ZNF497	Q6ZNH5	498 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	SNX29P2	Q8IUI4	249 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	LAX1	Q8IWV1	398 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	LY6G5B	Q8NDX9	201 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	ZNF714	Q96N38	554 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	SMR3A	Q99954	134 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	HDHD3	Q9BSH5	251 aa	Predicted RBP	8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	MIXL1	Q9H2W2	232 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	C7orf69	Q9H7B7	122 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	AUNIP	Q9H7T9	357 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	C12orf4	Q9NQ89	552 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	UBE2J1	Q9Y385	318 aa	Predicted RBP	8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	INSIG2	Q9Y5U4	225 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	AUP1	Q9Y679	476 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	LINC00312	Q9Y6C7	94 aa		8.38	□□□□□ -1.07
CPSF7-221	ENST00000543545	CD5L	O43866	347 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	CLPX	O76031	633 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	TOX4	O94842	621 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	LY6G6D	O95868	133 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	ZNF728	P0DKX0	622 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	GZMH	P20718	246 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	TNFSF8	P32971	234 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	PITPNA	Q00169	270 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	LTC4S	Q16873	150 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	PNLIPRP3	Q17RR3	467 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	ZNF260	Q3ZCT1	412 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	C6orf183	Q5T699	404 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	HACD4	Q5VWC8	232 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	CLEC9A	Q6UXN8	241 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	PRR18	Q8N4B5	295 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	OR13A1	Q8NGR1	328 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	RFESD	Q8TAC1	157 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	C8orf46	Q8TAG6	207 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	MRPL30	Q8TCC3	161 aa	Known RBP	8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	NUDCD2	Q8WVJ2	157 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	ARL11	Q969Q4	196 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	PCGF1	Q9BSM1	259 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	ST6GALNAC5	Q9BVH7	336 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	NXF2	Q9GZY0	626 aa	Known RBP	8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	GAL3ST2	Q9H3Q3	398 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	NCOR1P1	Q9H4R4	102 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	RAB9B	Q9NP90	201 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	ELF5	Q9UKW6	265 aa	Predicted RBP	8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	KCNK7	Q9Y2U2	307 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	A3GALT2	U3KPV4	340 aa		8.37	□□□□□ -1.07
CPSF7-221	ENST00000543545	TANC2	Q9HCD6	1990 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	KBTBD11-OT1	A0A1B0GTJ5	212 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	FABP12	A6NFH5	140 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545		A8MV72	311 aa	Predicted RBP	8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545		J3QLI3	93 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	SPINT2	O43291	252 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	PTHLH	P12272	177 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	RCC1	P18754	421 aa	Predicted RBP	8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	PRSS3	P35030	304 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	PAX5	Q02548	391 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	PAX2	Q02962	417 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	PAX8	Q06710	450 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	IL18	Q14116	193 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	UBALD1	Q8TB05	177 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	C15orf40	Q8WUR7	153 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	CORO2A	Q92828	525 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	DMRTB1	Q96MA1	342 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	WDFY2	Q96P53	400 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	TAF9B	Q9HBM6	251 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	SIRT7	Q9NRC8	400 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	TAS2R3	Q9NYW6	316 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	CALY	Q9NYX4	217 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	ZNF230	Q9UIE0	474 aa	Predicted RBP	8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	KPTN	Q9Y664	436 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	MAP1A	P78559	2803 aa	Predicted RBP	8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	CSPG4	Q6UVK1	2322 aa		8.36	□□□□□ -1.07
CPSF7-221	ENST00000543545	ITPR3	Q14573	2671 aa		8.35	□□□□□ -1.07

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms