RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MRM2Q9UI43 246 aaKnown RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 BRCA1P38398 1863 aaKnown RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 PSMB6P28072 239 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 FGF9P31371 208 aaPredicted RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 LGALS7P47929 136 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 ATP5J2P56134 94 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 SNRPNP63162 240 aaKnown RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 ACOT6Q3I5F7 207 aaPredicted RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 FAM27BQ5VT28 67 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 FAHD2BQ6P2I3 314 aaPredicted RBP6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 OR5A2Q8NGI9 324 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 FAHD2AQ96GK7 314 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 MAP6Q96JE9 813 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 RASL11BQ9BPW5 248 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 SOX7Q9BT81 388 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 SDK2Q58EX2 2172 aa6.04□□□□□ -1.44
SRGAP1-206ENST00000543397 JTBO76095 146 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 OR2F2O95006 317 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 WISP3O95389 354 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 H2AFB1P0C5Y9 115 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 SMIM18P0DKX4 95 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 ASCL1P50553 236 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 ASAH1Q13510 395 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 COX19Q49B96 90 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 TMEM128Q5BJH2 165 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 CLEC18BQ6UXF7 455 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 CRIPAKQ8N1N5 446 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 TMEM229BQ8NBD8 167 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 OR1L4Q8NGR5 311 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 GRAMD2BQ96HH9 432 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 CA10Q9NS85 328 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 FKBP11Q9NYL4 201 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 H3BP45 60 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 J3QW42 95 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 M0QZK8 103 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 SNAPINO95295 136 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 COX5AP20674 150 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 TGFBR1P36897 503 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 OPRK1P41145 380 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 TMEM267Q0VDI3 215 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 C12orf54Q6X4T0 127 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 TGIF2LYQ8IUE0 185 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 RNF133Q8WVZ7 376 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 DUX5Q96PT3 197 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 NIPSNAP3BQ9BS92 247 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 C1orf43Q9BWL3 253 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 RAXQ9Y2V3 346 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 RBBP6Q7Z6E9 1792 aaKnown RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 CENPVL1A0A0U1RR11 272 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 A1L4Q6 167 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 OOEPA6NGQ2 149 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 FFAR1O14842 300 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 FGF2P09038 288 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 KIR2DS2P43631 304 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 HLXQ14774 488 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 ACSM6Q6P461 480 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 TMEM116Q8NCL8 245 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 SLC26A10Q8NG04 563 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 ADAMTS17Q8TE56 1095 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 MISP3Q96FF7 219 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 ADGRG7Q96K78 797 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 ASCL3Q9NQ33 180 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 SMCO4Q9NRQ5 59 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 LOC105371267A0A1B0GV96 52 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 KIAA1324LA8MWY0 1029 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 TAAR5O14804 337 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 LANCL1O43813 399 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 CTSBP07858 339 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 ADRA2AP08913 450 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 GIPP09681 153 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 MMP9P14780 707 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF770Q6IQ21 691 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 LYG2Q86SG7 212 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 C2orf50Q96LR7 162 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 ACTR3CQ9C0K3 210 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 LPAR3Q9UBY5 353 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 LOC285556D6RIA3 1793 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 TMEM272A0A1B0GTI8 110 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 RPL12P30050 165 aaKnown RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 UCP2P55851 309 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 UBE2MP61081 183 aaKnown RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 RPL31P62899 125 aaKnown RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 TIGITQ495A1 244 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 CCDC144NLQ6NUI1 221 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 LRRTM1Q86UE6 522 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 GLCCI1Q86VQ1 547 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 LFNGQ8NES3 379 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 OR4S2Q8NH73 311 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF519Q8TB69 540 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 LHX4Q969G2 390 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 YIPF6Q96EC8 236 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 NEIL1Q96FI4 390 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 SAMD10Q9BYL1 202 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 TIMM9Q9Y5J7 89 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 INSIG2Q9Y5U4 225 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 MIA3Q5JRA6 1907 aa6.03□□□□□ -1.44
SRGAP1-206ENST00000543397 LTBP1Q14766 1721 aa6.02□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF716A6NP11 495 aa6.02□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF735P0CB33 412 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms