RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 TPTE2P1Q5T6R2 138 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 PRAMEF5Q5TYX0 476 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 PRAMEF6Q5VXH4 476 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 FAAP20Q6NZ36 180 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 NIPAL3Q6P499 406 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 SPSB3Q6PJ21 355 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 MOGAT3Q86VF5 341 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 CLECL1Q8IZS7 167 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF615Q8N8J6 731 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 DCAF4L2Q8NA75 395 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 CHST4Q8NCG5 386 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 MORN4Q8NDC4 146 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 OR2T33Q8NG76 320 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 OR4P4Q8NGL7 312 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 NFKBIDQ8NI38 313 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 TMEM239Q8WW34 195 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 AQP3Q92482 292 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 PTX4Q96A99 478 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 C2orf50Q96LR7 162 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 FER1L6-AS2Q96M78 137 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 PRAP1Q96NZ9 151 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 FNDC11Q9BVV2 318 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 OR51I1Q9H343 314 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 TMEM38BQ9NVV0 291 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF586Q9NXT0 402 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 PADI3Q9ULW8 664 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 SIGLEC7Q9Y286 467 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 MRPS33Q9Y291 106 aaKnown RBP4.99□□□□□ -1.61
XRCC4-206ENST00000542685 KIAA1549LQ6ZVL6 1849 aa4.99□□□□□ -1.61
XRCC4-206ENST00000542685 NINQ8N4C6 2090 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 COL4A2P08572 1712 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 PLXND1Q9Y4D7 1925 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 IGHV2-26A0A0B4J1V2 119 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 A0A0D9SEW6 157 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 FAM230AA0A1W2PPH8 454 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CASTOR2A6NHX0 329 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CEACAM18A8MTB9 384 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 HIDE1A8MVS5 230 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 M0R296 226 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 AGPAT2O15120 278 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 HCRTR1O43613 425 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 TRAF3IP2O43734 574 aaPredicted RBP4.98□□□□□ -1.61
XRCC4-206ENST00000542685 RAMP1O60894 148 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 GJB3O75712 270 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CPSF4O95639 269 aaKnown RBP4.98□□□□□ -1.61
XRCC4-206ENST00000542685 TSPAN13O95857 204 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CD160O95971 181 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CYB5AP00167 134 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 OPN1SWP03999 348 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 RHOCP08134 193 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CD99P14209 185 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 AKR1C4P17516 323 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 TCN2P20062 427 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CD22P20273 847 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 AQP1P29972 269 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CTRLP40313 264 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 NPBWR2P48146 333 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 METAP1P53582 386 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CRYBA4P53673 196 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 LIM2P55344 173 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 PFN3P60673 137 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 BTN3A2P78410 334 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 SRPXP78539 464 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 FOXF1Q12946 379 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 INSL4Q14641 139 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 VAMP3Q15836 100 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 BATFQ16520 125 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 DUSP5Q16690 384 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 ACSF3Q4G176 576 aaPredicted RBP4.98□□□□□ -1.61
XRCC4-206ENST00000542685 GPR157Q5UAW9 335 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 RPL7L1Q6DKI1 246 aaKnown RBP4.98□□□□□ -1.61
XRCC4-206ENST00000542685 SLC8B1Q6J4K2 584 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 MRPL54Q6P161 138 aaKnown RBP4.98□□□□□ -1.61
XRCC4-206ENST00000542685 GTF2H5Q6ZYL4 71 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 COX15Q7KZN9 410 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CENPVQ7Z7K6 275 aaPredicted RBP4.98□□□□□ -1.61
XRCC4-206ENST00000542685 TMEM150AQ86TG1 271 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 TMEM173Q86WV6 379 aaPredicted RBP4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CMTM1Q8IZ96 169 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 FAM58AQ8N1B3 248 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 SLC39A11Q8N1S5 342 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 STPG4Q8N801 248 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CYB561A3Q8NBI2 242 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 OR4N2Q8NGD1 307 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 OR52L1Q8NGH7 329 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 OR5K2Q8NHB8 316 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 PTPMT1Q8WUK0 201 aaPredicted RBP4.98□□□□□ -1.61
XRCC4-206ENST00000542685 FAM3CQ92520 227 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 DYRK2Q92630 601 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 APH1AQ96BI3 265 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 MOAP1Q96BY2 351 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 NEURL3Q96EH8 262 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 MRAP2Q96G30 205 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 OR10C1Q96KK4 312 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 POM121L2Q96KW2 1035 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 TSPAN32Q96QS1 320 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 OR5B12Q96R08 314 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 CD180Q99467 661 aa4.98□□□□□ -1.61
XRCC4-206ENST00000542685 NKX3-1Q99801 234 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms