RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 ZFP69Q49AA0 526 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 ZNF660Q6AZW8 331 aaPredicted RBP9.26□□□□□ -0.93
SCG3-202ENST00000542355 RNF152Q8N8N0 203 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 OR10Z1Q8NGY1 313 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 PLPPR1Q8TBJ4 325 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 GCM1Q9NP62 436 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 MYOZ1Q9NP98 299 aaPredicted RBP9.26□□□□□ -0.93
SCG3-202ENST00000542355 RASL12Q9NYN1 266 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 KALRNO60229 2985 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 IGHV3OR15-7A0A075B7D8 119 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 TRAV39A0A0B4J263 110 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 CEACAM18A8MTB9 384 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 SMLR1H3BR10 107 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.26□□□□□ -0.93
SCG3-202ENST00000542355 FABP7O15540 132 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 SIAH2O43255 324 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 HLA-AP01891 365 aaKnown RBP9.26□□□□□ -0.93
SCG3-202ENST00000542355 NFYAP23511 347 aaPredicted RBP9.26□□□□□ -0.93
SCG3-202ENST00000542355 FPR2P25090 351 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 FCGR2CP31995 323 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 MDH2P40926 338 aaKnown RBP9.26□□□□□ -0.93
SCG3-202ENST00000542355 COL10A1Q03692 680 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 PPP1R1AQ13522 171 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 BEX5Q5H9J7 111 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 Q6ZS49 121 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 TCTE3Q8IZS6 198 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 SCGB3A2Q96PL1 93 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 RTBDNQ9BSG5 229 aaPredicted RBP9.26□□□□□ -0.93
SCG3-202ENST00000542355 CISD1Q9NZ45 108 aaKnown RBP9.26□□□□□ -0.93
SCG3-202ENST00000542355 MGAT4CQ9UBM8 478 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 DNAJB11Q9UBS4 358 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 RNF115Q9Y4L5 304 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 NBASA2RRP1 2371 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 KIR2DS1A0A191URI9 304 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 TRDCB7Z8K6 153 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 M0R233 179 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 BET1O15155 118 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 LHBP01229 141 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 PSG2P11465 335 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 PGAM2P15259 253 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 APOBEC3AP31941 199 aaPredicted RBP9.25□□□□□ -0.93
SCG3-202ENST00000542355 PRDX2P32119 198 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 KIR2DS4P43632 304 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 IL13RA1P78552 427 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 KIR2DS1Q14954 304 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 TMEM177Q53S58 311 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 FAM201AQ5SY85 155 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 ZNF497Q6ZNH5 498 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 PEG10Q86TG7 708 aaKnown RBP9.25□□□□□ -0.93
SCG3-202ENST00000542355 PIK3IP1Q96FE7 263 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 TRAPPC2LQ9UL33 140 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 WIPI2Q9Y4P8 454 aa9.25□□□□□ -0.93
SCG3-202ENST00000542355 MEIKINA0A087WXM9 373 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 TRBV6-6A0A0A6YYG2 114 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 IFNL4K9M1U5 179 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 GOSR1O95249 250 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 CLDN14O95500 239 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 CYB5R3P00387 301 aaPredicted RBP9.24□□□□□ -0.93
SCG3-202ENST00000542355 ANXA3P12429 323 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 ZBTB25P24278 435 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 GLP1RP43220 463 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 GABRA2P47869 451 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 FXYD4P59646 89 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 AESQ08117 197 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 SHEQ5VZ18 495 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 TGIF2LYQ8IUE0 185 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 CD177Q8N6Q3 437 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 ASCC1Q8N9N2 400 aaKnown RBP9.24□□□□□ -0.93
SCG3-202ENST00000542355 TOMM40LQ969M1 308 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 DIRC2Q96SL1 478 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 CHIAQ9BZP6 476 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 RNF7Q9UBF6 113 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 SLC23A1Q9UHI7 598 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 PPP1R3CQ9UQK1 317 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 NPTNQ9Y639 398 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 ACACBO00763 2458 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 C9orf170A2RU37 121 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 H7C1Q1 480 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 TNFRSF1AP19438 455 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 ECI1P42126 302 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 HERPUD1Q15011 391 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 C2orf68Q2NKX9 166 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 TMEM128Q5BJH2 165 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 FAHD2BQ6P2I3 314 aaPredicted RBP9.24□□□□□ -0.93
SCG3-202ENST00000542355 ZNF880Q6PDB4 577 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 LYG2Q86SG7 212 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 C12orf45Q8N5I9 185 aaPredicted RBP9.24□□□□□ -0.93
SCG3-202ENST00000542355 OR2AK2Q8NG84 335 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 CASTOR1Q8WTX7 329 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 ITLN2Q8WWU7 325 aaPredicted RBP9.24□□□□□ -0.93
SCG3-202ENST00000542355 ERGIC1Q969X5 290 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 TMEM230Q96A57 120 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 FAHD2AQ96GK7 314 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 ZNF436Q9C0F3 470 aaPredicted RBP9.24□□□□□ -0.93
SCG3-202ENST00000542355 CLEC4MQ9H2X3 399 aaPredicted RBP9.24□□□□□ -0.93
SCG3-202ENST00000542355 DYNLRB1Q9NP97 96 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 DECR2Q9NUI1 292 aa9.24□□□□□ -0.93
SCG3-202ENST00000542355 IGKV1D-17A0A075B6S4 117 aa9.23□□□□□ -0.93
SCG3-202ENST00000542355 IGKV1-6A0A0C4DH72 117 aa9.23□□□□□ -0.93
SCG3-202ENST00000542355 DEFB108AA8MXU0 73 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms