RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ISPDA4D126 451 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 TMEM150BA6NC51 233 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 C5orf58C9J3I9 102 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 I3L4J1 428 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 TP53I11O14683 189 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 CYB5BO43169 146 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 RAD1O60671 282 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 OR2J3O76001 311 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 CLDN9O95484 217 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 PTTG1O95997 202 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 C1QBP02746 253 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 DCNP07585 359 aaKnown RBP3.32□□□□□ -1.88
YBX3-210ENST00000540975 OR10J4P0C629 311 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 PMCHP20382 165 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 CXCR1P25024 350 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 GABRR2P28476 465 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 GCAP28676 217 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 IFNGR2P38484 337 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 RAB7AP51149 207 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 TMBIM6P55061 237 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 KLF3P57682 345 aaPredicted RBP3.32□□□□□ -1.88
YBX3-210ENST00000540975 PLP1P60201 277 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 PKIAP61925 76 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 EMX2Q04743 252 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 BTN1A1Q13410 526 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 TPBGQ13641 420 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 RSPO1Q2MKA7 263 aaPredicted RBP3.32□□□□□ -1.88
YBX3-210ENST00000540975 PABPC1L2AQ5JQF8 200 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 TIMM23BQ5SRD1 257 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 TMEM42Q69YG0 159 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 PLET1Q6UQ28 207 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 FAM131AQ6UXB0 335 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 ZNF620Q6ZNG0 422 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 COMMD7Q86VX2 200 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 TMEM25Q86YD3 366 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 ZNF738Q8NE65 137 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 OR52E5Q8NH55 327 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 GPR151Q8TDV0 419 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 S100ZQ8WXG8 99 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 WDR34Q96EX3 536 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 NARS2Q96I59 477 aaKnown RBP3.32□□□□□ -1.88
YBX3-210ENST00000540975 CNBD2Q96M20 576 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 ZNF382Q96SR6 550 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 NAA50Q9GZZ1 169 aaKnown RBP3.32□□□□□ -1.88
YBX3-210ENST00000540975 MIXL1Q9H2W2 232 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 UBE2ZQ9H832 354 aaPredicted RBP3.32□□□□□ -1.88
YBX3-210ENST00000540975 POLE4Q9NR33 117 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 IL36GQ9NZH8 169 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 TMEM216Q9P0N5 145 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 PIPOXQ9P0Z9 390 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 COPZ2Q9P299 210 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 CLCF1Q9UBD9 225 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 PCYOX1Q9UHG3 505 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 ZNF391Q9UJN7 358 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 FARSAQ9Y285 508 aaKnown RBP3.32□□□□□ -1.88
YBX3-210ENST00000540975 AP4S1Q9Y587 144 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 HSPE1-MOB4S4R3N1 261 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 NFASCO94856 1347 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 RREB1Q92766 1687 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 ADAMTS7Q9UKP4 1686 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 LAMB4A4D0S4 1761 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 KDM3BQ7LBC6 1761 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 NAV1Q8NEY1 1877 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 TANC1Q9C0D5 1861 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 PCM1Q15154 2024 aa3.32□□□□□ -1.88
YBX3-210ENST00000540975 IDSB3KWA1 339 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 I3L521 148 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 PPP1R2P9O14990 202 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 TAPBPO15533 448 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 MT-CO2P00403 227 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 IGHG4P01861 327 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 SPNP16150 400 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 ZNF30P17039 623 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 AKR1C4P17516 323 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 BTCP35070 178 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 GCLMP48507 274 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 ACLYP53396 1101 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 TAS2R41P59536 307 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 RPS20P60866 119 aaKnown RBP3.31□□□□□ -1.88
YBX3-210ENST00000540975 MAXP61244 160 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 ACVR1Q04771 509 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 ZNF616Q08AN1 781 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 TWF1Q12792 350 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 MLLT11Q13015 90 aaPredicted RBP3.31□□□□□ -1.88
YBX3-210ENST00000540975 MAPK14Q16539 360 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 DGUOKQ16854 277 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 TPRG1LQ5T0D9 272 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 C6orf52Q5T4I8 152 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 SAMD13Q5VXD3 122 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 FAHD1Q6P587 224 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 DCUN1D2Q6PH85 259 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 TMPRSS11AQ6ZMR5 421 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 UNC93AQ86WB7 457 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 ZNF695Q8IW36 515 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 OR2L13Q8N349 312 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 C9orf62Q8N4C0 152 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 ITFG1Q8TB96 612 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 FAM45AQ8TCE6 357 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 ZFAND1Q8TCF1 268 aa3.31□□□□□ -1.88
YBX3-210ENST00000540975 RNASEH2CQ8TDP1 164 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms