RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 HLA-DMAP28067 261 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 FAUP35544 74 aaKnown RBP5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 MDH2P40926 338 aaKnown RBP5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 OR3A3P47888 321 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 TAS2R19P59542 299 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 IL13RA1P78552 427 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 SSBP1Q04837 148 aaKnown RBP5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 EDDM3AQ14507 147 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 ATXN7L3Q14CW9 347 aaPredicted RBP5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 GRK1Q15835 563 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 RGS21Q2M5E4 152 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 CHRFAM7AQ494W8 412 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 AVPI1Q5T686 147 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 SLC36A1Q7Z2H8 476 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 LYSMD2Q8IV50 215 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 CD177Q8N6Q3 437 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 TMEM185AQ8NFB2 350 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 OR5D13Q8NGL4 314 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 ANGPTL6Q8NI99 470 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 CCDC107Q8WV48 283 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 MAFIPQ8WZ33 124 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 DYRK2Q92630 601 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 MED30Q96HR3 178 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 SNX22Q96L94 193 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 LURAP1Q96LR2 239 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 CCL13Q99616 98 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 HDHD3Q9BSH5 251 aaPredicted RBP5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 CHST6Q9GZX3 395 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 LIME1Q9H400 295 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 RIMS4Q9H426 269 aaPredicted RBP5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF665Q9H7R5 613 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 IFT22Q9H7X7 185 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 MCUBQ9NWR8 336 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 RCC2Q9P258 522 aaKnown RBP5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF230Q9UIE0 474 aaPredicted RBP5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 TRAPPC2LQ9UL33 140 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 CSMD1Q96PZ7 3565 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 PLCE1Q9P212 2302 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 SPG11Q96JI7 2443 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 MEIKINA0A087WXM9 373 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 FAM240BA0A1B0GVZ2 78 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 TMEM82A0PJX8 343 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ANKRD20A5PA0PJZ0 165 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 TMEM30CPA0ZSE6 113 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 FUOMA2VDF0 154 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF736B4DX44 427 aaPredicted RBP5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 NPIPB6E9PJ23 425 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ADAM20O43506 726 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 NDUFB3O43676 98 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 NDUFA2O43678 99 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 SSX4O60224 188 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 PSPNO60542 156 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 PMP2P02689 132 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 AKAIN1P0CW23 69 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 NDUFB7P17568 137 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 DTYMKP23919 212 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 LMO1P25800 156 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 KCNJ3P48549 501 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 TMEM33P57088 247 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ARPC4P59998 168 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 BTG1P62324 171 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 MRPS11P82912 194 aaKnown RBP5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 IFITM3Q01628 133 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 AESQ08117 197 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ZMYND11Q15326 602 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 TRIM16LQ309B1 348 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 RNASE10Q5GAN6 216 aaKnown RBP5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 KRBOX4Q5JUW0 171 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 TEX36Q5VZQ5 186 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 STUMQ69YW2 141 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 STEAP1BQ6NZ63 245 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF782Q6ZMW2 699 aaPredicted RBP5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 LCNL1Q6ZST4 164 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 GDPD3Q7L5L3 318 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 HOGA1Q86XE5 327 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 MUC20Q8N307 709 aaPredicted RBP5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF561Q8N587 486 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 GVQW1Q8N7I0 195 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 TMEM229BQ8NBD8 167 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNRF1Q8ND25 227 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 BEST4Q8NFU0 473 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 OR4S1Q8NGB4 309 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 OR5H2Q8NGV7 314 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 OR4K15Q8NH41 348 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ENKURQ8TC29 256 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 TRIM63Q969Q1 353 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 CYYR1Q96J86 154 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 CHODLQ9H9P2 273 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 SEBOXQ9HB31 216 aaPredicted RBP5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF286AQ9HBT8 521 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 TMEM165Q9HC07 324 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 KCNIP1Q9NZI2 227 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 PCDHB10Q9UN67 800 aa5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 RBMX2Q9Y388 322 aaKnown RBP5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 ANKRD17O75179 2603 aaKnown RBP5.54□□□□□ -1.52
CLTCL1-206ENST00000540896 AKAP6Q13023 2319 aa5.53□□□□□ -1.52
CLTCL1-206ENST00000540896 TRAV39A0A0B4J263 110 aa5.53□□□□□ -1.52
CLTCL1-206ENST00000540896 KIR2DS1A0A191URI9 304 aa5.53□□□□□ -1.52
CLTCL1-206ENST00000540896 NAP1L6A6NFF2 107 aa5.53□□□□□ -1.52
CLTCL1-206ENST00000540896 DISC1C4P0D8 188 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms