RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	ERVFRD-1	P60508	538 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	UBE2K	P61086	200 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783		Q3ZCU0	254 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	KHDC3L	Q587J8	217 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SGPP2	Q8IWX5	399 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C20orf196	Q8IYI0	205 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF610	Q8N9Z0	462 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ADPRHL1	Q8NDY3	354 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR52M1	Q8NGK5	317 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	LYPD6B	Q8NI32	183 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	DYRK2	Q92630	601 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	EMG1	Q92979	244 aa	Known RBP	4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HES7	Q9BYE0	225 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	LIME1	Q9H400	295 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C12orf49	Q9H741	205 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF462	Q96JM2	2506 aa		4.9	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SHANK1	Q9Y566	2161 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LAMA1	P25391	3075 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IGKV1-9	A0A0C4DH69	117 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ST8SIA5	O15466	376 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H2BK	O60814	126 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IGHG3	P01860	377 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CRYAA	P02489	173 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H2BJ	P06899	126 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TMEM225B	P0DP42	221 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H2BO	P23527	126 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H2BB	P33778	126 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF121	P58317	390 aa	Predicted RBP	4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H2BD	P58876	126 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H2BC	P62807	126 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RHEB	Q15382	184 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST2H2BE	Q16778	126 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FAM214B	Q7L5A3	538 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SLC16A14	Q7RTX9	510 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FADS6	Q8N9I5	356 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR8B12	Q8NGG6	310 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GTF3A	Q92664	365 aa	Known RBP	4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H2BH	Q93079	126 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PIGT	Q969N2	578 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H2BN	Q99877	126 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H2BM	Q99879	126 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CRLF2	Q9HC73	371 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SSUH2	Q9Y2M2	353 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MYO7B	Q6PIF6	2116 aa		4.9	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		A0A087X0M5	115 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		A0A1B0GX30	115 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GAPDH	P04406	335 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR5AC1	P0C628	307 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	WT1	P19544	449 aa	Predicted RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PMEL	P40967	661 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PIGP	P57054	158 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PDCD1	Q15116	288 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	USF2	Q15853	346 aa	Predicted RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR2T2	Q6IF00	324 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MEX3B	Q6ZN04	569 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SSC4D	Q8WTU2	575 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ASB10	Q8WXI3	467 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	URM1	Q9BTM9	101 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PBDC1	Q9BVG4	233 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DYNLRB1	Q9NP97	96 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LIPG	Q9Y5X9	500 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TRIO	O75962	3097 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FAM24A	A6NFZ4	105 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF724	A8MTY0	619 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PHOX2A	O14813	284 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NPIPB7	O75200	414 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SNRPC	P09234	159 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CA7	P43166	264 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DLK1	P80370	383 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	THEM4	Q5T1C6	240 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TMEM108	Q6UXF1	575 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	BATF2	Q8N1L9	274 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF283	Q8N7M2	679 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR11L1	Q8NGX0	322 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR2G3	Q8NGZ4	309 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MALSU1	Q96EH3	234 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GPHA2	Q96T91	129 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PECR	Q9BY49	303 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MAGT1	Q9H0U3	335 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZDHHC11	Q9H8X9	412 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	BTBD17	A6NE02	478 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF850	A8MQ14	1090 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CEACAM18	A8MTB9	384 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PPP1R2P9	O14990	202 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ANGPTL7	O43827	346 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CLDN14	O95500	239 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H1B	P16401	226 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RBP2	P50120	134 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SST	P61278	116 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RND3	P61587	244 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LSM6	P62312	80 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NKX6-1	P78426	367 aa	Predicted RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ELOB	Q15370	118 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF124	Q15973	351 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	C3AR1	Q16581	482 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TBC1D28	Q2M2D7	210 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SLC25A53	Q5H9E4	307 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF468	Q5VIY5	522 aa	Predicted RBP	4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms