RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 HIST1H3AP68431 136 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 CLEC12BQ2HXU8 276 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 HIST2H3PS2Q5TEC6 136 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 HIST2H3AQ71DI3 136 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 RNF150Q9ULK6 438 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 HSPA12AO43301 675 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 CHST1O43916 411 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 ACAA1P09110 424 aaPredicted RBP12.11□□□□□ -0.47
INO80E-203ENST00000540562 RAB5BP61020 215 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 EIF2S3LQ2VIR3 472 aaKnown RBP12.11□□□□□ -0.47
INO80E-203ENST00000540562 TMPRSS7Q7RTY8 843 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 GCNT2Q8N0V5 402 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 CPT1CQ8TCG5 803 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 CLDN23Q96B33 292 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 OR1A1Q9P1Q5 309 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 OR14J1Q9UGF5 321 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 CHD3Q12873 2000 aaKnown RBP12.11□□□□□ -0.47
INO80E-203ENST00000540562 GPR137BO60478 399 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 WDR1O75083 606 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 BMP5P22003 454 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 RPS10P46783 165 aaKnown RBP12.11□□□□□ -0.47
INO80E-203ENST00000540562 ERVS71-1P61550 626 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 DCAF12Q5T6F0 453 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 MOB3AQ96BX8 217 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 RSG1Q9BU20 258 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 FOXJ2Q9P0K8 574 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 PRSS50Q9UI38 385 aa12.11□□□□□ -0.47
INO80E-203ENST00000540562 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
INO80E-203ENST00000540562 IGKV1-6A0A0C4DH72 117 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 ZFP92A6NM28 416 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 P2RY1P47900 373 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 SULT1A1P50225 295 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 SPINK9Q5DT21 86 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 UBAC2Q8NBM4 344 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 M1APQ8TC57 530 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 PSMF1Q92530 271 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 CDX2Q99626 313 aaPredicted RBP12.1□□□□□ -0.47
INO80E-203ENST00000540562 NBASA2RRP1 2371 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 ARPC4-TTLL3A0A0A6YYG9 625 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 FAM157AC9JC47 383 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 TRAPPC2LH3BP13 241 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 IGHV3-13P01766 116 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 IGHV3-7P01780 117 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 DANCRP0C864 163 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 MEOX2P50222 304 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 ARL6IP1Q15041 203 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 SOHLH1Q5JUK2 328 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 LCN15Q6UWW0 184 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 SUMF2Q8NBJ7 301 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 CPNE4Q96A23 557 aaPredicted RBP12.1□□□□□ -0.47
INO80E-203ENST00000540562 C18orf12Q96KH6 178 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 PLEKHA2Q9HB19 425 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 NIT2Q9NQR4 276 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 FZR1Q9UM11 496 aa12.1□□□□□ -0.47
INO80E-203ENST00000540562 LTC4SQ16873 150 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 C4orf17Q53FE4 359 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 THNSL2Q86YJ6 484 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 BOD1Q96IK1 185 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 SLC22A20A6NK97 555 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 YIF1AO95070 293 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 PSG2P11465 335 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 DEFA4P12838 97 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 C10orf91Q5T1B1 145 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 NUFIP2Q7Z417 695 aaKnown RBP12.09□□□□□ -0.47
INO80E-203ENST00000540562 HEATR1Q9H583 2144 aaKnown RBP12.09□□□□□ -0.47
INO80E-203ENST00000540562 PKDREJQ9NTG1 2253 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 PCNX2A6NKB5 2137 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 H7C1Q1 480 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 CELA3BP08861 270 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 METTL15P1P0C7V9 234 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 PTAFRP25105 342 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 ELLP55199 621 aaPredicted RBP12.09□□□□□ -0.47
INO80E-203ENST00000540562 LINC00205P59089 165 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 TMEM252Q8N6L7 170 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 CCDC71LQ8N9Z2 235 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 HIST1H2AAQ96QV6 131 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 IL17BQ9UHF5 180 aa12.09□□□□□ -0.47
INO80E-203ENST00000540562 RRP8O43159 456 aaKnown RBP12.08□□□□□ -0.48
INO80E-203ENST00000540562 MMP7P09237 267 aaPredicted RBP12.08□□□□□ -0.48
INO80E-203ENST00000540562 DTYMKP23919 212 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 PMP22Q01453 160 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 TPRX1Q8N7U7 411 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 CYB561D1Q8N8Q1 229 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 SH2D2AQ9NP31 389 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 COA4Q9NYJ1 87 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 GNG13Q9P2W3 67 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 HSF4Q9ULV5 492 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 TUSC2O75896 110 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 MPV17LQ2QL34 196 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 ABHD17BQ5VST6 288 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 MCEMP1Q8IX19 187 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 ZDHHC23Q8IYP9 409 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 LILRB1Q8NHL6 650 aaPredicted RBP12.08□□□□□ -0.48
INO80E-203ENST00000540562 TMEM222Q9H0R3 208 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 ARRDC1-AS1Q9H2J1 176 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 VSIRQ9H7M9 311 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 KPTNQ9Y664 436 aa12.08□□□□□ -0.48
INO80E-203ENST00000540562 GRPP07492 148 aa12.07□□□□□ -0.48
INO80E-203ENST00000540562 ZFP36L1Q07352 338 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms