RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ABHD12Q8N2K0 398 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 MALSU1Q96EH3 234 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 KIRREL1Q96J84 757 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 GFI1Q99684 422 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 MGLLQ99685 303 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 BARHL1Q9BZE3 327 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 SLITRK2Q9H156 845 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 BEX1Q9HBH7 125 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 TCF7L1Q9HCS4 588 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 ISYNA1Q9NPH2 558 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 CALYQ9NYX4 217 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 HILPDAQ9Y5L2 63 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 KBTBD11-OT1A0A1B0GTJ5 212 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 CLPSL1A2RUU4 121 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 POM121CA8CG34 1229 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 MGMTP16455 207 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 SRMP19623 302 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 KCNJ3P48549 501 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 AANATQ16613 207 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 OLFML2AQ68BL7 652 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 OR10K2Q6IF99 312 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 CCBE1Q6UXH8 406 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-212ENST00000540230 LINC00596Q86U02 117 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 RFESDQ8TAC1 157 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 NDNFQ8TB73 568 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 WFDC12Q8WWY7 111 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 FAM46BQ96A09 425 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 UQCC2Q9BRT2 126 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 SELENOIQ9C0D9 397 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 ACOT13Q9NPJ3 140 aa12.16□□□□□ -0.46
UBE3B-212ENST00000540230 RCC2Q9P258 522 aaKnown RBP12.16□□□□□ -0.46
UBE3B-212ENST00000540230 VGLL3A8MV65 326 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 CRTAPO75718 401 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-212ENST00000540230 IL1AP01583 271 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 IGLV1-47P01700 117 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 IGHV3-7P01780 117 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 NFYBP25208 207 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 CD34P28906 385 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 FABP5Q01469 135 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 GPR176Q14439 515 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 SSX1Q16384 188 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 LTC4SQ16873 150 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 MINOS1Q5TGZ0 78 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 SIGIRRQ6IA17 410 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 SLC35E4Q6ICL7 350 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 OR52W1Q6IF63 320 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 UBALD1Q8TB05 177 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 PHYHIPQ92561 330 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 LEAP2Q969E1 77 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 Q96M66 194 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 NCOR1P1Q9H4R4 102 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 BLOC1S6Q9UL45 172 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 RRP15Q9Y3B9 282 aaKnown RBP12.15□□□□□ -0.46
UBE3B-212ENST00000540230 RNF114Q9Y508 228 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 MINOS1-NBL1R4GNA1 71 aa12.15□□□□□ -0.46
UBE3B-212ENST00000540230 A0A087X0M5 115 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 A0A1B0GX30 115 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 NPIPB11E5RHQ5 1161 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 TSPAN9O75954 239 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 EMX1Q04741 257 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-212ENST00000540230 FBLN7Q53RD9 439 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 C1orf100Q5SVJ3 147 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 TMEM219Q86XT9 240 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 ZNF565Q8N9K5 539 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 NEK7Q8TDX7 302 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 CCDC107Q8WV48 283 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 MRPS24Q96EL2 167 aaKnown RBP12.14□□□□□ -0.47
UBE3B-212ENST00000540230 LINC00574Q9H8X3 128 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 PCDHB16Q9NRJ7 776 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 IDI2-AS1Q9NZ38 188 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 TCF19Q9Y242 345 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 SIGLEC9Q9Y336 463 aa12.14□□□□□ -0.47
UBE3B-212ENST00000540230 A0A1B0GUS0 222 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 TMEM30CPA0ZSE6 113 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 DENRO43583 198 aaKnown RBP12.13□□□□□ -0.47
UBE3B-212ENST00000540230 MPIG6BO95866 241 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 VSIG8P0DPA2 414 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 CD37P11049 281 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 HTR1DP28221 377 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 PROK1P58294 105 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 HLA-DRB5Q30154 266 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 GLT8D1Q68CQ7 371 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 RAB12Q6IQ22 244 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 FAM53AQ6NSI3 398 aaPredicted RBP12.13□□□□□ -0.47
UBE3B-212ENST00000540230 ZNF497Q6ZNH5 498 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 ZNF367Q7RTV3 350 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 RTN4RL2Q86UN3 420 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 C16orf95Q9H693 158 aa12.13□□□□□ -0.47
UBE3B-212ENST00000540230 A6NDX4 124 aa12.12□□□□□ -0.47
UBE3B-212ENST00000540230 C15orf65H3BRN8 121 aa12.12□□□□□ -0.47
UBE3B-212ENST00000540230 SLC22A1O15245 554 aa12.12□□□□□ -0.47
UBE3B-212ENST00000540230 MT-ND4P03905 459 aa12.12□□□□□ -0.47
UBE3B-212ENST00000540230 CD24P25063 80 aa12.12□□□□□ -0.47
UBE3B-212ENST00000540230 GABARAPL2P60520 117 aa12.12□□□□□ -0.47
UBE3B-212ENST00000540230 UNC119Q13432 240 aa12.12□□□□□ -0.47
UBE3B-212ENST00000540230 ZNF596Q8TC21 504 aa12.12□□□□□ -0.47
UBE3B-212ENST00000540230 DPM3Q9P2X0 92 aa12.12□□□□□ -0.47
UBE3B-212ENST00000540230 AK6Q9Y3D8 172 aaKnown RBP12.12□□□□□ -0.47
UBE3B-212ENST00000540230 PEX16Q9Y5Y5 336 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms