RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 MPV17LQ2QL34 196 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 PEAR1Q5VY43 1037 aaPredicted RBP17.43■□□□□ 0.38
TMEM260-203ENST00000539559 MYPOPQ86VE0 399 aaPredicted RBP17.43■□□□□ 0.38
TMEM260-203ENST00000539559 TVP23CQ96ET8 276 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 SIGLEC12Q96PQ1 595 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 A0A0G2JMM0 328 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 A0A1W2PPB8 328 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 A0A1W2PRS3 328 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 ZFP92A6NM28 416 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 KIR3DP1A8MWS1 328 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 RAB11AP62491 216 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 HERPUD1Q15011 391 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 PCOLCEQ15113 449 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 THNSL2Q86YJ6 484 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 IL22RA1Q8N6P7 574 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 PLPPR1Q8TBJ4 325 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 TMEM38BQ9NVV0 291 aa17.43■□□□□ 0.38
TMEM260-203ENST00000539559 A0A0G2JRQ6 117 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 hCG_38984A0A1B0GV85 526 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 WRBO00258 174 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 CCL2P13500 99 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 BCL3P20749 454 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 FGF8P55075 233 aaPredicted RBP17.42■□□□□ 0.38
TMEM260-203ENST00000539559 TMEM42Q69YG0 159 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 UNQ6494/PRO21346Q6UXR6 183 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 CCDC74BQ96LY2 380 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 VSIRQ9H7M9 311 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 EDN3P14138 238 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 CCNOP22674 350 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 HNF4GQ14541 408 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 KHDC3LQ587J8 217 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 FRZBQ92765 325 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 SSX3Q99909 188 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 RSG1Q9BU20 258 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 SLC25A31Q9H0C2 315 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 WNT5BQ9H1J7 359 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 PRO1933Q9H354 126 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 TREM2Q9NZC2 230 aa17.42■□□□□ 0.38
TMEM260-203ENST00000539559 FUT6P51993 359 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 CEACAM16Q2WEN9 425 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 C9orf135Q5VTT2 229 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 OR2T2Q6IF00 324 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 GPR137CQ8N3F9 429 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 NEK7Q8TDX7 302 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 ABHD5Q8WTS1 349 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 PRDM13Q9H4Q3 707 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 C19orf25Q9UFG5 118 aaPredicted RBP17.41■□□□□ 0.38
TMEM260-203ENST00000539559 DIDO1Q9BTC0 2240 aaKnown RBP17.41■□□□□ 0.38
TMEM260-203ENST00000539559 FREM1Q5H8C1 2179 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 SLC22A20A6NK97 555 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 PATE3B3GLJ2 98 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 VAMP5O95183 116 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 TRGC1P0CF51 173 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 FABP4P15090 132 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 PAX9P55771 341 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 ZNF506Q5JVG8 444 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 TMEM211Q6ICI0 200 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 LCN15Q6UWW0 184 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 S100PBPQ96BU1 408 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 TMEM56Q96MV1 263 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 UNKLQ9H9P5 680 aaKnown RBP17.41■□□□□ 0.38
TMEM260-203ENST00000539559 TMEM56-RWDD3S4R434 201 aa17.41■□□□□ 0.38
TMEM260-203ENST00000539559 CHD3Q12873 2000 aaKnown RBP17.41■□□□□ 0.38
TMEM260-203ENST00000539559 GATCO43716 136 aaKnown RBP17.4■□□□□ 0.38
TMEM260-203ENST00000539559 GLIPR1P48060 266 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 DSCR4P56555 118 aaPredicted RBP17.4■□□□□ 0.38
TMEM260-203ENST00000539559 DEFA6Q01524 100 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 GAMTQ14353 236 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 EXT1Q16394 746 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 IFI44Q8TCB0 444 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 ZNF665Q9H7R5 613 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 ARHGAP21Q5T5U3 1957 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 OR6C6A6NF89 314 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 ZNF732B4DXR9 585 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 NMSQ5H8A3 153 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 SP5Q6BEB4 398 aaPredicted RBP17.4■□□□□ 0.38
TMEM260-203ENST00000539559 SLC25A24Q6NUK1 477 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 CCDC54Q8NEL0 328 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 OR51H1Q8NH63 302 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 TAAR3PQ9P1P4 343 aa17.4■□□□□ 0.38
TMEM260-203ENST00000539559 IGKV1-6A0A0C4DH72 117 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 CER1O95813 267 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 TK1P04183 234 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 HSPB1P04792 205 aaKnown RBP17.39■□□□□ 0.37
TMEM260-203ENST00000539559 NKX6-1P78426 367 aaPredicted RBP17.39■□□□□ 0.37
TMEM260-203ENST00000539559 HIST3H2BBQ8N257 126 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 OR2H1Q9GZK4 316 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 SMDT1Q9H4I9 107 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 KIAA1549Q9HCM3 1950 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 PPP1R2P9O14990 202 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 CXCL13O43927 109 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 TRIM61Q5EBN2 209 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 ZNF880Q6PDB4 577 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 SSX7Q7RTT5 188 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 AAED1Q7RTV5 226 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 FOXB1Q99853 325 aa17.39■□□□□ 0.37
TMEM260-203ENST00000539559 FGF23Q9GZV9 251 aaPredicted RBP17.39■□□□□ 0.37
TMEM260-203ENST00000539559 CST2P09228 141 aa17.38■□□□□ 0.37
TMEM260-203ENST00000539559 FKBP2P26885 142 aaKnown RBP17.38■□□□□ 0.37
TMEM260-203ENST00000539559 CD200P41217 278 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms