RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 HSPD1P10809 573 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 MUC1P15941 1255 aaPredicted RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 HLA-GP17693 338 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GPX2P18283 190 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PRTN3P24158 256 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GABRR2P28476 465 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 OR10J1P30954 320 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 NUDT1P36639 197 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 UQCRFS1P47985 274 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 CXCL12P48061 93 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 HSPA13P48723 471 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GNG10P50151 68 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 CDKN2DP55273 166 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PAFAH1B2P68402 229 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 POU2AF1Q16633 256 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PTPN20Q4JDL3 420 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 CLVS2Q5SYC1 327 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 FAHD1Q6P587 224 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ERICH5Q6P6B1 374 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 Q6ZQT7 251 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PAGE2Q7Z2X7 111 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF571Q7Z3V5 609 aaPredicted RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GALNT10Q86SR1 603 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 NELFCDQ8IXH7 590 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 BOD1L2Q8IYS8 172 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 VKORC1L1Q8N0U8 176 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SLC34A3Q8N130 599 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GPR119Q8TDV5 335 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 APOBEC3DQ96AK3 386 aaPredicted RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PGLYRP3Q96LB9 341 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PITX2Q99697 317 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 DDA1Q9BW61 102 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 LCE3DQ9BYE3 92 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 POLR2J2Q9GZM3 115 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 POLR2J3Q9H1A7 115 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 BOLA2Q9H3K6 86 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 REEP1Q9H902 201 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 RHOFQ9HBH0 211 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 MYOZ1Q9NP98 299 aaPredicted RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 MTFP1Q9UDX5 166 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 CBY1Q9Y3M2 126 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SLC25A15Q9Y619 301 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SDK1Q7Z5N4 2213 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 AFDNP55196 1824 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 OBSCNQ5VST9 7968 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 CCDC88BA6NC98 1476 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SCN1AP35498 2009 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TROQ12816 1431 aaPredicted RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF638Q14966 1978 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PIEZO1Q92508 2521 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 MIA3Q5JRA6 1907 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PLXND1Q9Y4D7 1925 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ADGRB2O60241 1585 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 UGGT1Q9NYU2 1555 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SIPA1L1O43166 1804 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 IGKV6D-21A0A0A0MT36 114 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GOLGA8IPA6NC78 632 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 BTNL10A8MVZ5 291 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 C21orf140B9A014 251 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SMLR1H3BR10 107 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GOLGA8MH3BSY2 632 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 KMOO15229 486 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 FOXH1O75593 365 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GATBO75879 557 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SLC22A5O76082 557 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 LHBP01229 141 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 IFNA1P01562 189 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GUSBP08236 651 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TCP1P17987 556 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 M6PRP20645 277 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PPICP45877 212 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SLCO1A2P46721 670 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 CYB561P49447 251 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 PSMB2P49721 201 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GFERP55789 205 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 S100A12P80511 92 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 RUNX1Q01196 453 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 DGCR6Q14129 220 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 MMDQ15546 238 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 C4orf26Q17RF5 130 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 NDUFAF6Q330K2 333 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 RFX4Q33E94 735 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 YIF1BQ5BJH7 314 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 HHATQ5VTY9 493 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TWF2Q6IBS0 349 aaKnown RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ADM2Q7Z4H4 148 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SETD3Q86TU7 594 aaPredicted RBP0.64□□□□□ -2.31
HIF1A-204ENST00000539097 TAC4Q86UU9 113 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF584Q8IVC4 421 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 BBS7Q8IWZ6 715 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 ZBED8Q8IZ13 594 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 GATD1Q8NB37 220 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 FBXO36Q8NEA4 188 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 OR11H7Q8NGC8 314 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 HAUS1Q96CS2 278 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 OPTNQ96CV9 577 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SPACA5Q96QH8 159 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 NDFIP1Q9BT67 221 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 XPNPEP1Q9NQW7 623 aa0.64□□□□□ -2.31
HIF1A-204ENST00000539097 SIRT7Q9NRC8 400 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms