RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 GDNFP39905 211 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 RAB13P51153 203 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 PRRX1P54821 245 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 DOC2BQ14184 412 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 CCDC144NLQ6NUI1 221 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 BAIAP2L2Q6UXY1 529 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 SLC16A12Q6ZSM3 486 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 Q6ZTK2 550 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 KLHDC1Q8N7A1 406 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 SUMF2Q8NBJ7 301 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 OR13A1Q8NGR1 328 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 OR9G1Q8NH87 305 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 MYDGFQ969H8 173 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 ORAI1Q96D31 301 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 AKR1E2Q96JD6 320 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 NKX3-1Q99801 234 aaPredicted RBP9.3□□□□□ -0.92
RTN3-209ENST00000538995 MND1Q9BWT6 205 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 ZNF702PQ9H963 129 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 ZNF286AQ9HBT8 521 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 SPACA1Q9HBV2 294 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 ING3Q9NXR8 418 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 NKX1-2Q9UD57 310 aaPredicted RBP9.3□□□□□ -0.92
RTN3-209ENST00000538995 ING4Q9UNL4 249 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 SIGLEC9Q9Y336 463 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 AMMECR1Q9Y4X0 333 aaPredicted RBP9.3□□□□□ -0.92
RTN3-209ENST00000538995 PNMA8CA0A1B0GUJ8 204 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 TMEM30CPA0ZSE6 113 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 NPIPB11E5RHQ5 1161 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 BUB1B-PAK6H3BSN5 160 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 GEMIN2O14893 280 aaKnown RBP9.29□□□□□ -0.92
RTN3-209ENST00000538995 GABPB1Q06547 395 aaPredicted RBP9.29□□□□□ -0.92
RTN3-209ENST00000538995 SLC22A6Q4U2R8 563 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 C6orf141Q5SZD1 244 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 TPTE2P1Q5T6R2 138 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 TMEM219Q86XT9 240 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 JAGN1Q8N5M9 183 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 MS4A15Q8N5U1 240 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 PLPPR1Q8TBJ4 325 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 CFHR4Q92496 578 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 UQCC2Q9BRT2 126 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 PRSS22Q9GZN4 317 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 MMP28Q9H239 520 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 VCX3BQ9H321 246 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 LIN7BQ9HAP6 207 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 SCN3BQ9NY72 215 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 IDI2-AS1Q9NZ38 188 aa9.29□□□□□ -0.92
RTN3-209ENST00000538995 RCC2Q9P258 522 aaKnown RBP9.29□□□□□ -0.92
RTN3-209ENST00000538995 MRPS28Q9Y2Q9 187 aaKnown RBP9.29□□□□□ -0.92
RTN3-209ENST00000538995 NOTCH1P46531 2555 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM172BPA6NC97 362 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A10PA6NDY2 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A18PA6NE21 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A16PA6NEW6 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A20PA6NIJ5 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A7PA6NKC0 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A12PA8MX19 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A5PA8MXJ8 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A23PA8MXZ1 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 LY6LH3BQJ8 138 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A15PP0C7V4 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A13PP0C7W8 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A14PP0C7W9 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A24PP0C7X0 464 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 GZMHP20718 246 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 MNDAP41218 407 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 AQP4P55087 323 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 AWAT2Q6E213 333 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 GLIPR1L1Q6UWM5 242 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 LYPD6Q86Y78 171 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 MRGPRDQ8TDS7 321 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 NRG4Q8WWG1 115 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 PHYHIPQ92561 330 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 MUL1Q969V5 352 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 ANKRD60Q9BZ19 345 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 SERTAD4Q9NUC0 356 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 GHRLQ9UBU3 117 aa9.28□□□□□ -0.92
RTN3-209ENST00000538995 LSM2Q9Y333 95 aaKnown RBP9.28□□□□□ -0.92
RTN3-209ENST00000538995 A0A1W2PPK0 400 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 J3QR06 171 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 PIN1P1O15428 100 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 RRP9O43818 475 aaKnown RBP9.27□□□□□ -0.93
RTN3-209ENST00000538995 CA11O75493 328 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 OR2F2O95006 317 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 MAS1P04201 325 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 GLAP06280 429 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 CSF1P09603 554 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 JUNBP17275 347 aaPredicted RBP9.27□□□□□ -0.93
RTN3-209ENST00000538995 MYF6P23409 242 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 NFYBP25208 207 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 SSTR5P35346 364 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 HSPA13P48723 471 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 SLC35A2P78381 396 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 MADCAM1Q13477 382 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 GPR50Q13585 617 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 RBM39Q14498 530 aaKnown RBP9.27□□□□□ -0.93
RTN3-209ENST00000538995 SPHARQ15513 63 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 TMEM30BQ3MIR4 351 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 Q3ZCU0 254 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 ATAD3CQ5T2N8 411 aa9.27□□□□□ -0.93
RTN3-209ENST00000538995 ZNF497Q6ZNH5 498 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms