RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SEBOXQ9HB31 216 aaPredicted RBP11.78□□□□□ -0.52
CD4-208ENST00000538827 TMEM165Q9HC07 324 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 KIF25Q9UIL4 384 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 PCDHB10Q9UN67 800 aa11.78□□□□□ -0.52
CD4-208ENST00000538827 MEIKINA0A087WXM9 373 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 NDUFB3O43676 98 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
CD4-208ENST00000538827 TK1P04183 234 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 CSN2P05814 226 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 DTYMKP23919 212 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 HLA-DMAP28067 261 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 GLP1RP43220 463 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 TAS2R19P59542 299 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 DEFA1P59665 94 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 DEFA3P59666 94 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 ARPC4P59998 168 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 AESQ08117 197 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 RSBN1Q5VWQ0 802 aaPredicted RBP11.77□□□□□ -0.53
CD4-208ENST00000538827 ZNF497Q6ZNH5 498 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 FGFRL1Q8N441 504 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 SPICQ8N5J4 248 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 POC5Q8NA72 575 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 OR8B3Q8NGG8 313 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 ZFAND2BQ8WV99 257 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 H1FXQ92522 213 aaKnown RBP11.77□□□□□ -0.53
CD4-208ENST00000538827 OR8B2Q96RD0 313 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 PIMREGQ9BSJ6 248 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 ZNF286AQ9HBT8 521 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 CTSZQ9UBR2 303 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 SLC25A10Q9UBX3 287 aaPredicted RBP11.77□□□□□ -0.53
CD4-208ENST00000538827 TRAPPC2LQ9UL33 140 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 EDARQ9UNE0 448 aa11.77□□□□□ -0.53
CD4-208ENST00000538827 RBMX2Q9Y388 322 aaKnown RBP11.77□□□□□ -0.53
CD4-208ENST00000538827 ANKRD20A5PA0PJZ0 165 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 MEX3AA1L020 520 aaKnown RBP11.76□□□□□ -0.53
CD4-208ENST00000538827 ZNF736B4DX44 427 aaPredicted RBP11.76□□□□□ -0.53
CD4-208ENST00000538827 H7C1Q1 480 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 K7N7A8 449 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 NDUFA2O43678 99 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 MT-ND4P03905 459 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 GLIPR1P48060 266 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 TMEM33P57088 247 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 SSBP1Q04837 148 aaKnown RBP11.76□□□□□ -0.53
CD4-208ENST00000538827 KLF9Q13886 244 aaPredicted RBP11.76□□□□□ -0.53
CD4-208ENST00000538827 TMEM155Q4W5P6 130 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 LRRC10Q5BKY1 277 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 ATPAF1Q5TC12 328 aaPredicted RBP11.76□□□□□ -0.53
CD4-208ENST00000538827 SLC35E4Q6ICL7 350 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 FAAP20Q6NZ36 180 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 DNM1P46Q6ZS02 220 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 MOB1BQ7L9L4 216 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 NLRC3Q7RTR2 1065 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 HOGA1Q86XE5 327 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 BEST4Q8NFU0 473 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 OR5D13Q8NGL4 314 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 OR5H2Q8NGV7 314 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 FAM168AQ92567 244 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 SNAPC3Q92966 411 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 OCSTAMPQ9BR26 566 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 GSX2Q9BZM3 304 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 BPESC1Q9GZL8 116 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 SHARPINQ9H0F6 387 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 FAM234AQ9H0X4 552 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 TAS2R8Q9NYW2 309 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 TBC1D24Q9ULP9 559 aa11.76□□□□□ -0.53
CD4-208ENST00000538827 CSPG4Q6UVK1 2322 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 FUOMA2VDF0 154 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 M0QYG6 137 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 DVL1O14640 695 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 NAPSAO96009 420 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 PMP2P02689 132 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 CD3DP04234 171 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 AKAIN1P0CW23 69 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 FAUP35544 74 aaKnown RBP11.75□□□□□ -0.53
CD4-208ENST00000538827 P2RX3P56373 397 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 HLA-DRB3P79483 266 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 CHRFAM7AQ494W8 412 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 STEAP1BQ6NZ63 245 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 Q6ZPA2 131 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 TMEM229BQ8NBD8 167 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 NEIL1Q96FI4 390 aaPredicted RBP11.75□□□□□ -0.53
CD4-208ENST00000538827 FOXC2Q99958 501 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 RIMS4Q9H426 269 aaPredicted RBP11.75□□□□□ -0.53
CD4-208ENST00000538827 Q9N2K0 584 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 BEX4Q9NWD9 120 aaPredicted RBP11.75□□□□□ -0.53
CD4-208ENST00000538827 MCUBQ9NWR8 336 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 ANAPC10Q9UM13 185 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 PRRC2AP48634 2157 aaKnown RBP11.75□□□□□ -0.53
CD4-208ENST00000538827 JMJD1CQ15652 2540 aa11.75□□□□□ -0.53
CD4-208ENST00000538827 IGKV1D-8A0A087WSZ0 117 aa11.74□□□□□ -0.53
CD4-208ENST00000538827 ODAMA1E959 279 aa11.74□□□□□ -0.53
CD4-208ENST00000538827 CENPXA8MT69 81 aa11.74□□□□□ -0.53
CD4-208ENST00000538827 LYRM1O43325 122 aa11.74□□□□□ -0.53
CD4-208ENST00000538827 RAB3DO95716 219 aa11.74□□□□□ -0.53
CD4-208ENST00000538827 HRH1P35367 487 aa11.74□□□□□ -0.53
CD4-208ENST00000538827 OR3A3P47888 321 aa11.74□□□□□ -0.53
CD4-208ENST00000538827 TAS2R46P59540 309 aa11.74□□□□□ -0.53
CD4-208ENST00000538827 ASAH1Q13510 395 aa11.74□□□□□ -0.53
CD4-208ENST00000538827 DEFB113Q30KQ7 82 aa11.74□□□□□ -0.53
CD4-208ENST00000538827 ACTBL2Q562R1 376 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms