RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 HOXB5P09067 269 aa17.23■□□□□ 0.35
DDX55-205ENST00000538744 RCC1P18754 421 aaPredicted RBP17.23■□□□□ 0.35
DDX55-205ENST00000538744 CD40P25942 277 aa17.23■□□□□ 0.35
DDX55-205ENST00000538744 ZNF345Q14585 488 aa17.23■□□□□ 0.35
DDX55-205ENST00000538744 VHLLQ6RSH7 139 aa17.23■□□□□ 0.35
DDX55-205ENST00000538744 ZNF565Q8N9K5 539 aa17.23■□□□□ 0.35
DDX55-205ENST00000538744 CABLES2Q9BTV7 478 aa17.23■□□□□ 0.35
DDX55-205ENST00000538744 UBQLN2Q9UHD9 624 aa17.23■□□□□ 0.35
DDX55-205ENST00000538744 DMXL2Q8TDJ6 3036 aa17.23■□□□□ 0.35
DDX55-205ENST00000538744 LAMA5O15230 3695 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 SHANK1Q9Y566 2161 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 IGLV3-9A0A075B6K5 115 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 OR5AC1P0C628 307 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 TMEM187Q14656 261 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 SMIM21Q3B7S5 101 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 C22orf34Q6ZV56 151 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 SSX8Q7RTT4 187 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 OR10C1Q96KK4 312 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 TAAR3PQ9P1P4 343 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 MBD2Q9UBB5 411 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 MEMO1Q9Y316 297 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 MAB21L2Q9Y586 359 aa17.22■□□□□ 0.35
DDX55-205ENST00000538744 ZSCAN5BA6NJL1 495 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 MPTX1A8MV57 137 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 OR2F2O95006 317 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 PTBP3O95758 552 aaKnown RBP17.21■□□□□ 0.35
DDX55-205ENST00000538744 CFDP00746 253 aaPredicted RBP17.21■□□□□ 0.35
DDX55-205ENST00000538744 S100A1P23297 94 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 LMO1P25800 156 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 OR2F1Q13607 317 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 ATXN7L3Q14CW9 347 aaPredicted RBP17.21■□□□□ 0.35
DDX55-205ENST00000538744 PCSK4Q6UW60 755 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 OR11L1Q8NGX0 322 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 PRR7Q8TB68 274 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 SECTM1Q8WVN6 248 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 RND1Q92730 232 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 TRAPPC2LQ9UL33 140 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 TRBV6-7A0A0A0MS04 114 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 IFNA21P01568 189 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 KCNJ3P48549 501 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 CEBPDP49716 269 aaPredicted RBP17.21■□□□□ 0.35
DDX55-205ENST00000538744 AP2S1P53680 142 aaPredicted RBP17.21■□□□□ 0.35
DDX55-205ENST00000538744 SELENOVP59797 346 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 TMEM108Q6UXF1 575 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 OR8H3Q8N146 312 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 KCNRGQ8N5I3 272 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 OR10J5Q8NHC4 309 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 LRRC29Q8WV35 223 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 VKORC1Q9BQB6 163 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 SLC5A7Q9GZV3 580 aa17.21■□□□□ 0.35
DDX55-205ENST00000538744 DSPP15924 2871 aaKnown RBP17.21■□□□□ 0.34
DDX55-205ENST00000538744 GNRHRP30968 328 aa17.2■□□□□ 0.34
DDX55-205ENST00000538744 RND3P61587 244 aa17.2■□□□□ 0.34
DDX55-205ENST00000538744 SP6Q3SY56 376 aa17.2■□□□□ 0.34
DDX55-205ENST00000538744 LIAT1Q6ZQX7 453 aa17.2■□□□□ 0.34
DDX55-205ENST00000538744 ACOT7LQ6ZUV0 252 aa17.2■□□□□ 0.34
DDX55-205ENST00000538744 LRTM2Q8N967 370 aa17.2■□□□□ 0.34
DDX55-205ENST00000538744 OR10Z1Q8NGY1 313 aa17.2■□□□□ 0.34
DDX55-205ENST00000538744 WIPI2Q9Y4P8 454 aa17.2■□□□□ 0.34
DDX55-205ENST00000538744 NPIPB11E5RHQ5 1161 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 IFNL4K9M1U5 179 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 GPR31O00270 319 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 MPPED1O15442 326 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 PTAFRP25105 342 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 KLRB1Q12918 225 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 WFDC8Q8IUA0 241 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 H1FOOQ8IZA3 346 aaPredicted RBP17.19■□□□□ 0.34
DDX55-205ENST00000538744 INO80EQ8NBZ0 244 aaPredicted RBP17.19■□□□□ 0.34
DDX55-205ENST00000538744 NUP37Q8NFH4 326 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 KIRREL1Q96J84 757 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 DMRTA2Q96SC8 542 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 MBNL3Q9NUK0 354 aaKnown RBP17.19■□□□□ 0.34
DDX55-205ENST00000538744 CHD3Q12873 2000 aaKnown RBP17.19■□□□□ 0.34
DDX55-205ENST00000538744 PIEZO2Q9H5I5 2752 aa17.19■□□□□ 0.34
DDX55-205ENST00000538744 IGKV1D-13A0A0B4J2D9 117 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 TMEM30CPA0ZSE6 113 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 RNF222A6NCQ9 220 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 PSPNO60542 156 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 IGKV1-13P0DP09 117 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 IAH1Q2TAA2 248 aaPredicted RBP17.18■□□□□ 0.34
DDX55-205ENST00000538744 GGNBP1Q5YKI7 109 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 LDLRAD3Q86YD5 345 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 LGI3Q8N145 548 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 MRPL24Q96A35 216 aaKnown RBP17.18■□□□□ 0.34
DDX55-205ENST00000538744 MRPL37Q9BZE1 423 aaKnown RBP17.18■□□□□ 0.34
DDX55-205ENST00000538744 FBXO9Q9UK97 447 aaPredicted RBP17.18■□□□□ 0.34
DDX55-205ENST00000538744 OR2W1Q9Y3N9 320 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 RP1L1Q8IWN7 2480 aaPredicted RBP17.18■□□□□ 0.34
DDX55-205ENST00000538744 ATMQ13315 3056 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 TRAV39A0A0B4J263 110 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 PHF1O43189 567 aaPredicted RBP17.18■□□□□ 0.34
DDX55-205ENST00000538744 PET100P0DJ07 73 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 CFHR2P36980 270 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 CASP6P55212 293 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 IL15RAQ13261 267 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 HMGN3Q15651 99 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 SLC35E4Q6ICL7 350 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 PRSS54Q6PEW0 395 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 ZNF818PQ6ZRF7 136 aa17.18■□□□□ 0.34
DDX55-205ENST00000538744 SLC51BQ86UW2 128 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms