RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 OR5C1Q8NGR4 320 aa10.24□□□□□ -0.77
CPNE8-203ENST00000538596 RDH5Q92781 318 aa10.24□□□□□ -0.77
CPNE8-203ENST00000538596 ZNF703Q9H7S9 590 aaPredicted RBP10.24□□□□□ -0.77
CPNE8-203ENST00000538596 RNF122Q9H9V4 155 aa10.24□□□□□ -0.77
CPNE8-203ENST00000538596 ZFHX4Q86UP3 3567 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 A0A1W2PPE2 198 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 B4E171 279 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 TSPAN7P41732 249 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 CEACAM21Q3KPI0 293 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 LINC00696Q6ZRV3 163 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 MED12LQ86YW9 2145 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 TMEM252Q8N6L7 170 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 C15orf54Q8N8G6 183 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 TMEM45BQ96B21 275 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 TMEM56Q96MV1 263 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 TECTBQ96PL2 329 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 TMEM56-RWDD3S4R434 201 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 ARGFXA6NJG6 315 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 CDS2O95674 445 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 PTAFRP25105 342 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 CEBPGP53567 150 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 RAB1AP62820 205 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 PEAR1Q5VY43 1037 aaPredicted RBP10.23□□□□□ -0.77
CPNE8-203ENST00000538596 RBMS3Q6XE24 437 aaKnown RBP10.23□□□□□ -0.77
CPNE8-203ENST00000538596 FAM24BQ8N5W8 94 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 Q8NFD4 153 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 FAM86C1Q9NVL1 165 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 BOKQ9UMX3 212 aaPredicted RBP10.23□□□□□ -0.77
CPNE8-203ENST00000538596 KIAA2026Q5HYC2 2103 aa10.23□□□□□ -0.77
CPNE8-203ENST00000538596 IGKV3D-15A0A087WSY6 115 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 A0A0G2JRQ6 117 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 TRAPPC2LH3BP13 241 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 H3BP45 60 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 ATXN7O15265 892 aaPredicted RBP10.22□□□□□ -0.77
CPNE8-203ENST00000538596 DYNLT3P51808 116 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 UBALD1Q8TB05 177 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 PLPPR1Q8TBJ4 325 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 EGLN1Q9GZT9 426 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 KCNJ16Q9NPI9 418 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 FOXJ2Q9P0K8 574 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 PUS1Q9Y606 427 aaKnown RBP eCLIP10.22□□□□□ -0.77
CPNE8-203ENST00000538596 COL27A1Q8IZC6 1860 aaPredicted RBP10.22□□□□□ -0.77
CPNE8-203ENST00000538596 CHST1O43916 411 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 FBP1P09467 338 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 RAB5BP61020 215 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 ZNF154Q13106 437 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 NMSQ5H8A3 153 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 SPATA46Q5T0L3 261 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 COMMD1Q8N668 190 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 SUMF2Q8NBJ7 301 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 SLC35B3Q9H1N7 401 aa10.22□□□□□ -0.77
CPNE8-203ENST00000538596 LYRM2Q9NU23 88 aaPredicted RBP10.22□□□□□ -0.77
CPNE8-203ENST00000538596 STRAPQ9Y3F4 350 aaKnown RBP10.22□□□□□ -0.77
CPNE8-203ENST00000538596 IGHV3-64DA0A0J9YX35 117 aa10.21□□□□□ -0.77
CPNE8-203ENST00000538596 A0A1W2PNU3 283 aaPredicted RBP10.21□□□□□ -0.77
CPNE8-203ENST00000538596 C9orf172C9J069 976 aa10.21□□□□□ -0.77
CPNE8-203ENST00000538596 RHBDL1O75783 438 aa10.21□□□□□ -0.77
CPNE8-203ENST00000538596 ACAA1P09110 424 aaPredicted RBP10.21□□□□□ -0.77
CPNE8-203ENST00000538596 FOLR2P14207 255 aa10.21□□□□□ -0.77
CPNE8-203ENST00000538596 MEOX2P50222 304 aa10.21□□□□□ -0.77
CPNE8-203ENST00000538596 SULT1A1P50225 295 aa10.21□□□□□ -0.77
CPNE8-203ENST00000538596 VAMP2P63027 116 aa10.21□□□□□ -0.77
CPNE8-203ENST00000538596 HMGN3Q15651 99 aa10.21□□□□□ -0.77
CPNE8-203ENST00000538596 NUFIP2Q7Z417 695 aaKnown RBP10.21□□□□□ -0.77
CPNE8-203ENST00000538596 MYPOPQ86VE0 399 aaPredicted RBP10.21□□□□□ -0.77
CPNE8-203ENST00000538596 OR51H1Q8NH63 302 aa10.21□□□□□ -0.77
CPNE8-203ENST00000538596 PLEKHF2Q9H8W4 249 aa10.21□□□□□ -0.77
CPNE8-203ENST00000538596 MRPS18CQ9Y3D5 142 aaKnown RBP10.21□□□□□ -0.77
CPNE8-203ENST00000538596 CD300LBA8K4G0 201 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 TUSC2O75896 110 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 PMELP40967 661 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 RAB5CP51148 216 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 OR2B8PP59922 312 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 HAGHQ16775 308 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 HIKESHIQ53FT3 197 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 SPSB3Q6PJ21 355 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 PCSK4Q6UW60 755 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 FAM185AQ8N0U4 392 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 MRPL30Q8TCC3 161 aaKnown RBP10.21□□□□□ -0.78
CPNE8-203ENST00000538596 IL1F10Q8WWZ1 152 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 APOBEC3DQ96AK3 386 aaPredicted RBP10.21□□□□□ -0.78
CPNE8-203ENST00000538596 FAM173AQ9BQD7 235 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 TTTY12Q9BZ98 90 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 C12orf49Q9H741 205 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 ATP23Q9Y6H3 246 aa10.21□□□□□ -0.78
CPNE8-203ENST00000538596 PITX3O75364 302 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 WNT5AP41221 380 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 SRPXP78539 464 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 OR1C1Q15619 314 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 ADAM5Q6NVV9 412 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 C1orf210Q8IVY1 113 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 MKXQ8IYA7 352 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 PRR18Q8N4B5 295 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 POM121L2Q96KW2 1035 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 TAAR3PQ9P1P4 343 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 PRSS50Q9UI38 385 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 GTF3C1Q12789 2109 aa10.2□□□□□ -0.78
CPNE8-203ENST00000538596 TNRC6AQ8NDV7 1962 aaKnown RBP10.2□□□□□ -0.78
CPNE8-203ENST00000538596 TRAV24A0A0B4J272 114 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms