RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MUC15Q8N387 334 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 OR1L4Q8NGR5 311 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 VSTM2AQ8TAG5 236 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 WDR89Q96FK6 387 aaPredicted RBP4.66□□□□□ -1.66
LRP6-203ENST00000538239 HDHD3Q9BSH5 251 aaPredicted RBP4.66□□□□□ -1.66
LRP6-203ENST00000538239 SRRQ9GZT4 340 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 PIPOXQ9P0Z9 390 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 RABAC1Q9UI14 185 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 ZNF727A8MUV8 499 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 DXOO77932 396 aaKnown RBP4.66□□□□□ -1.66
LRP6-203ENST00000538239 IGHA1P01876 353 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 MT-ND4LP03901 98 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 DAOP14920 347 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SNAI3Q3KNW1 292 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SLC16A12Q6ZSM3 486 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 DOLPP1Q86YN1 238 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 ZDHHC22Q8N966 263 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 ZNRF4Q8WWF5 429 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 BCL2L2Q92843 193 aaPredicted RBP4.66□□□□□ -1.66
LRP6-203ENST00000538239 CCL28Q9NRJ3 127 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 ATPIF1Q9UII2 106 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SNRPGP15A8MWD9 76 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 OGG1O15527 345 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 CCDC144NLQ6NUI1 221 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 RFLNBQ8N5W9 214 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 ZSWIM8A7E2V4 1837 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 C9orf170A2RU37 121 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 MMP7P09237 267 aaPredicted RBP4.66□□□□□ -1.66
LRP6-203ENST00000538239 CEACAM21Q3KPI0 293 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 GGNBP1Q5YKI7 109 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 PRSS27Q9BQR3 290 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 CHST5Q9GZS9 411 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 SIRT7Q9NRC8 400 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 TMED3Q9Y3Q3 217 aa4.66□□□□□ -1.66
LRP6-203ENST00000538239 FAM24AA6NFZ4 105 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 RPL36A-HNRNPH2H7BZ11 118 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 TMEM127O75204 238 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 LOXL3P58215 753 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 FAM3AP98173 230 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 CLEC9AQ6UXN8 241 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 RELL2Q8NC24 303 aaPredicted RBP4.65□□□□□ -1.66
LRP6-203ENST00000538239 FAM57AQ8TBR7 257 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 ZNF703Q9H7S9 590 aaPredicted RBP4.65□□□□□ -1.66
LRP6-203ENST00000538239 MGAMO43451 1857 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 LOC105371242A0A075B767 164 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 IGHV1-69-2A0A0G2JMI3 117 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 UMAD1C9J7I0 102 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 PTP4A3O75365 173 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 FAM106CPP0CH98 169 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 TFPI2P48307 235 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 ARF6P62330 175 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 KCNMB1Q16558 191 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 GUCA2BQ16661 112 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 XAF1Q6GPH4 301 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 H3F3CQ6NXT2 135 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 LINC00596Q86U02 117 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 ZNF596Q8TC21 504 aa4.65□□□□□ -1.66
LRP6-203ENST00000538239 MED19A0JLT2 244 aaPredicted RBP4.65□□□□□ -1.67
LRP6-203ENST00000538239 PF4V1P10720 104 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 MPV17LQ2QL34 196 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 C1orf174Q8IYL3 243 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 FAM103A1Q9BTL3 118 aaKnown RBP4.65□□□□□ -1.67
LRP6-203ENST00000538239 TRBV5-3A0A0A0MS03 114 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 A0A1W2PNV4 684 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 NPIPB8E9PQR5 432 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 K7N7A8 449 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 RECKO95980 971 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 FBP1P09467 338 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 CTF1Q16619 201 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 SLC25A47Q6Q0C1 308 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 KLF14Q8TD94 323 aaPredicted RBP4.65□□□□□ -1.67
LRP6-203ENST00000538239 ANXA10Q9UJ72 324 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 TRAV8-7A0A075B6U6 113 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 TTRP02766 147 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 RAB5CP51148 216 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 ZNF552Q9H707 407 aaPredicted RBP4.65□□□□□ -1.67
LRP6-203ENST00000538239 MTFP1Q9UDX5 166 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 CHD5Q8TDI0 1954 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 PPIAL4CA0A0B4J2A2 164 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 SEC14L6B5MCN3 397 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 PPIAL4GP0DN37 164 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 SPP1P10451 314 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 FGF9P31371 208 aaPredicted RBP4.65□□□□□ -1.67
LRP6-203ENST00000538239 ERVFC1-1P60608 527 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 SLC35B1P78383 322 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 GLDNQ6ZMI3 551 aaPredicted RBP4.65□□□□□ -1.67
LRP6-203ENST00000538239 TEX29Q8N6K0 151 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 DUSP18Q8NEJ0 188 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 OR8G5Q8NG78 346 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 OR5C1Q8NGR4 320 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 SMIM7Q9BQ49 75 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 CABLES2Q9BTV7 478 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 MIOXQ9UGB7 285 aa4.65□□□□□ -1.67
LRP6-203ENST00000538239 ASCC3Q8N3C0 2202 aaKnown RBP4.64□□□□□ -1.67
LRP6-203ENST00000538239 C20orf202A1L168 122 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 SYNGR1O43759 233 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 OR2H2O95918 312 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 UMODP07911 640 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 KIR3DL2P43630 455 aa4.64□□□□□ -1.67
LRP6-203ENST00000538239 GZMMP51124 257 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms