RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 PRR19A6NJB7 356 aa9.8□□□□□ -0.84
LINC00346-201ENST00000538077 FOXS1O43638 330 aa9.8□□□□□ -0.84
LINC00346-201ENST00000538077 CTF1Q16619 201 aa9.8□□□□□ -0.84
LINC00346-201ENST00000538077 LIAT1Q6ZQX7 453 aa9.8□□□□□ -0.84
LINC00346-201ENST00000538077 OR4X1Q8NH49 305 aa9.8□□□□□ -0.84
LINC00346-201ENST00000538077 RAB40CQ96S21 281 aa9.8□□□□□ -0.84
LINC00346-201ENST00000538077 SLC7A10Q9NS82 523 aa9.8□□□□□ -0.84
LINC00346-201ENST00000538077 FOXJ2Q9P0K8 574 aa9.8□□□□□ -0.84
LINC00346-201ENST00000538077 OR51B2Q9Y5P1 312 aa9.8□□□□□ -0.84
LINC00346-201ENST00000538077 RPL30P62888 115 aaKnown RBP9.79□□□□□ -0.84
LINC00346-201ENST00000538077 CDC20Q12834 499 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 DGAT2L7PQ6IED9 249 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 LRP11Q86VZ4 500 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 MRGPRFQ96AM1 343 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 AP5S1Q9NUS5 200 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 NUP205Q92621 2012 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 KIAA1217Q5T5P2 1943 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 TCRBV16S1A1N1A0A5B0 115 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 TRAPPC2P0DI81 140 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 TRAPPC2BP0DI82 140 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 ZNF770Q6IQ21 691 aaPredicted RBP9.79□□□□□ -0.84
LINC00346-201ENST00000538077 OR2V2Q96R30 315 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 PIMREGQ9BSJ6 248 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 SLC52A3Q9NQ40 469 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 TMEM74BQ9NUR3 256 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 CISD1Q9NZ45 108 aaKnown RBP9.79□□□□□ -0.84
LINC00346-201ENST00000538077 RNF24Q9Y225 148 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 YTHDF2Q9Y5A9 579 aaKnown RBP9.79□□□□□ -0.84
LINC00346-201ENST00000538077 CLDN14O95500 239 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 ZNF137PP52743 207 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 VAMP3Q15836 100 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 C10orf113Q5VZT2 155 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 HMGCLL1Q8TB92 370 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 ZNF596Q8TC21 504 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 ZNF501Q96CX3 271 aaPredicted RBP9.79□□□□□ -0.84
LINC00346-201ENST00000538077 GUCD1Q96NT3 240 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 VDAC1P21796 283 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 CDCP2Q5VXM1 449 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 ASB5Q8WWX0 329 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 MS4A5Q9H3V2 200 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 FCN1O00602 326 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 CHST1O43916 411 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 TBX19O60806 448 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 HSBP1O75506 76 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 PGA3P0DJD8 388 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 UCNP55089 124 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 SEZ6L2Q6UXD5 910 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 TMEM251Q8N6I4 163 aa9.79□□□□□ -0.84
LINC00346-201ENST00000538077 SCN1AP35498 2009 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 TRAV34A0A0B4J273 112 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 FFAR1O14842 300 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 WIPI2Q9Y4P8 454 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 POLR2AP24928 1970 aaKnown RBP9.78□□□□□ -0.84
LINC00346-201ENST00000538077 MCM3APO60318 1980 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 DLL1O00548 723 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 CTSBP07858 339 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 INO80CQ6PI98 192 aaPredicted RBP9.78□□□□□ -0.84
LINC00346-201ENST00000538077 PRNTQ86SH4 94 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 LINC01560Q8TB33 94 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 Q8WTZ3 238 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 WDR54Q9H977 334 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 HPXP02790 462 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 C21orf58P58505 322 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 FHL5Q5TD97 284 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 FDX2Q6P4F2 183 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 ZNF826PQ6ZT77 177 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 OVCH2Q7RTZ1 564 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 SLC25A45Q8N413 288 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 SRD5A3Q9H8P0 318 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 PILRBQ9UKJ0 227 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 PRDX2P32119 198 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 GZMKP49863 264 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 KCNMB1Q16558 191 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 SPICQ8N5J4 248 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 OR1L1Q8NH94 360 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 DTD1Q8TEA8 209 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 IL22RA2Q969J5 263 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 SLC17A5Q9NRA2 495 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 KLHDC2Q9Y2U9 406 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 IGKV3D-11A0A0A0MRZ8 115 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 IGKV3-11P04433 115 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 PF4V1P10720 104 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 STARD4Q96DR4 205 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 MS4A10Q96PG2 267 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 RNF122Q9H9V4 155 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 PLAC1Q9HBJ0 212 aa9.78□□□□□ -0.84
LINC00346-201ENST00000538077 CSF2RBP32927 897 aa9.77□□□□□ -0.84
LINC00346-201ENST00000538077 GFRA1P56159 465 aa9.77□□□□□ -0.84
LINC00346-201ENST00000538077 RPL31P62899 125 aaKnown RBP9.77□□□□□ -0.84
LINC00346-201ENST00000538077 TMEM241Q24JQ0 296 aa9.77□□□□□ -0.84
LINC00346-201ENST00000538077 PLPPR5Q32ZL2 321 aa9.77□□□□□ -0.84
LINC00346-201ENST00000538077 ZNF66Q6ZN08 573 aa9.77□□□□□ -0.84
LINC00346-201ENST00000538077 OR2C3Q8N628 320 aa9.77□□□□□ -0.84
LINC00346-201ENST00000538077 ZNF714Q96N38 554 aa9.77□□□□□ -0.84
LINC00346-201ENST00000538077 LOC389332A0A1B0GUA5 103 aa9.77□□□□□ -0.85
LINC00346-201ENST00000538077 HLA-DRB3P79483 266 aa9.77□□□□□ -0.85
LINC00346-201ENST00000538077 TOMM20LQ6UXN7 152 aa9.77□□□□□ -0.85
LINC00346-201ENST00000538077 ZNF841Q6ZN19 808 aa9.77□□□□□ -0.85
LINC00346-201ENST00000538077 LEAP2Q969E1 77 aa9.77□□□□□ -0.85
LINC00346-201ENST00000538077 AURKAIP1Q9NWT8 199 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms