RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 IAPPP10997 89 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 DAOP14920 347 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 MUC1P15941 1255 aaPredicted RBP7.45□□□□□ -1.22
UBE3B-208ENST00000538070 CEACAM21Q3KPI0 293 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 EIF5AL1Q6IS14 154 aaKnown RBP7.45□□□□□ -1.22
UBE3B-208ENST00000538070 FAM58AQ8N1B3 248 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 FAM117AQ9C073 453 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 OR1A1Q9P1Q5 309 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 COL6A6A6NMZ7 2263 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 CDRT15L2A8MXV6 281 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 IL18BPO95998 194 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 DTYMKP23919 212 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 FBXW9Q5XUX1 488 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 C2CD4CQ8TF44 421 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 POM121L2Q96KW2 1035 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 PCSK5Q92824 1860 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 DEFB108AA8MXU0 73 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 RPL36A-HNRNPH2H7BZ11 118 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 WNT9BO14905 357 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 GPR37O15354 613 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 DEDDO75618 318 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 SNRNP70P08621 437 aaKnown RBP7.45□□□□□ -1.22
UBE3B-208ENST00000538070 OR13C7P0DN81 318 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 NKX2-1P43699 371 aaPredicted RBP7.45□□□□□ -1.22
UBE3B-208ENST00000538070 TBC1D28Q2M2D7 210 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 CMTM1Q8IZ96 169 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 TMEM178AQ8NBL3 297 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 OR10J5Q8NHC4 309 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 SLC25A40Q8TBP6 338 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 PRDM14Q9GZV8 571 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 FAM234AQ9H0X4 552 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 TREM2Q9NZC2 230 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 LPAR3Q9UBY5 353 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 MLXQ9UH92 298 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 HSF4Q9ULV5 492 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 ABCA4P78363 2273 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 BORCS7-ASMTA0A0B4J1R7 106 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 IGHV3-43A0A0B4J1X8 118 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 TERTO14746 1132 aaKnown RBP7.44□□□□□ -1.22
UBE3B-208ENST00000538070 IGHV3-43DP0DP04 118 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 PVALBP20472 110 aaPredicted RBP7.44□□□□□ -1.22
UBE3B-208ENST00000538070 NPBWR1P48145 328 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 GNG3P63215 75 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 TAGLNQ01995 201 aaKnown RBP7.44□□□□□ -1.22
UBE3B-208ENST00000538070 EDDM3AQ14507 147 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF273Q14593 569 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 MIDNQ504T8 468 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 TMEM42Q69YG0 159 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 OR4A4PQ8NGN8 299 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 BARX1Q9HBU1 254 aaPredicted RBP7.44□□□□□ -1.22
UBE3B-208ENST00000538070 PRELID1Q9Y255 219 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 AKAP6Q13023 2319 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 TLN1Q9Y490 2541 aaKnown RBP7.44□□□□□ -1.22
UBE3B-208ENST00000538070 ATG12O94817 140 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 GLAP06280 429 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 FTH1P19P0C7X4 201 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 EIF5AP63241 154 aaKnown RBP7.44□□□□□ -1.22
UBE3B-208ENST00000538070 RUNX1Q01196 453 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 RNPS1Q15287 305 aaKnown RBP7.44□□□□□ -1.22
UBE3B-208ENST00000538070 SURF2Q15527 256 aaPredicted RBP7.44□□□□□ -1.22
UBE3B-208ENST00000538070 VWA1Q6PCB0 445 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 BEND4Q6ZU67 534 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 WFDC1Q9HC57 220 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 ANAPC10Q9UM13 185 aa7.44□□□□□ -1.22
UBE3B-208ENST00000538070 PQLC2LA1A4F0 135 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 E5RGE8 158 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 WT1P19544 449 aaPredicted RBP7.43□□□□□ -1.22
UBE3B-208ENST00000538070 FGF12P61328 243 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 PPP1CBP62140 327 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 TMEM267Q0VDI3 215 aaPredicted RBP7.43□□□□□ -1.22
UBE3B-208ENST00000538070 PRAMEF6Q5VXH4 476 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF573Q86YE8 665 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 SPAG16Q8N0X2 631 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 OR1K1Q8NGR3 316 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 NANOS1Q8WY41 292 aaKnown RBP7.43□□□□□ -1.22
UBE3B-208ENST00000538070 MOB3AQ96BX8 217 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 RBMXL1Q96E39 390 aaKnown RBP7.43□□□□□ -1.22
UBE3B-208ENST00000538070 PHYHIPLQ96FC7 376 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 WDYHV1Q96HA8 205 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 AQP10Q96PS8 301 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 ABHD14AQ9BUJ0 271 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 SUCNR1Q9BXA5 334 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 SPRY4Q9C004 299 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 NSG2Q9Y328 171 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 TIMM8AO60220 97 aaPredicted RBP7.43□□□□□ -1.22
UBE3B-208ENST00000538070 CST4P01036 141 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 SFTA3P0C7M3 94 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 IGF2RP11717 2491 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 RPL35P42766 123 aaKnown RBP7.43□□□□□ -1.22
UBE3B-208ENST00000538070 TGFBR3Q03167 851 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 SRSF4Q08170 494 aaKnown RBP7.43□□□□□ -1.22
UBE3B-208ENST00000538070 OR8G1Q15617 311 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 SPINK9Q5DT21 86 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 TMEM211Q6ICI0 200 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 DHRS11Q6UWP2 260 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 ZGRF1Q86YA3 2104 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 SVBPQ8N300 66 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 RPS10P5Q9NQ39 176 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 UQCC1Q9NVA1 299 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF391Q9UJN7 358 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms