RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CHST1O43916 411 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 OR7C1O76099 320 aaPredicted RBP13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 MAS1P04201 325 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 CD37P11049 281 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 CRHBPP24387 322 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 SRSF4Q08170 494 aaKnown RBP13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM189A2Q15884 450 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 SLC22A6Q4U2R8 563 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 ACSM3Q53FZ2 586 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 CCBE1Q6UXH8 406 aaPredicted RBP13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 IZUMO2Q6UXV1 221 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 JAGN1Q8N5M9 183 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 DTX3Q8N9I9 347 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 OR10A7Q8NGE5 316 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 PHYHIPQ92561 330 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 MUL1Q969V5 352 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 KIRREL1Q96J84 757 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 ZNF286AQ9HBT8 521 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 ISYNA1Q9NPH2 558 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 RCC2Q9P258 522 aaKnown RBP13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 DPM3Q9P2X0 92 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 PITPNC1Q9UKF7 332 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A10PA6NDY2 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A18PA6NE21 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A16PA6NEW6 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A20PA6NIJ5 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A7PA6NKC0 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A12PA8MX19 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A5PA8MXJ8 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A23PA8MXZ1 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 IL1AP01583 271 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A15PP0C7V4 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A13PP0C7W8 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A14PP0C7W9 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A24PP0C7X0 464 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 RAB13P51153 203 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 TPBGQ13641 420 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 INSL4Q14641 139 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 MED22Q15528 200 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 HLA-DRB5Q30154 266 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 C11orf88Q6PI97 169 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 BRICD5Q6PL45 260 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 GLIPR1L1Q6UWM5 242 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 PRSS48Q7RTY5 328 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 NDNFQ8TB73 568 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 CREB3L1Q96BA8 519 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 SPACA1Q9HBV2 294 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 ABCB10Q9NRK6 738 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 ING3Q9NXR8 418 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 CALYQ9NYX4 217 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 GHRLQ9UBU3 117 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 HILPDAQ9Y5L2 63 aa13.85□□□□□ -0.19
SFSWAP-205ENST00000537164 LY6LH3BQJ8 138 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 RGS10O43665 173 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 GABRA5P31644 462 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 GLP1RP43220 463 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 EFNB2P52799 333 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 AWAT2Q6E213 333 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 SLC16A12Q6ZSM3 486 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 Q8N2B8 174 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 OR4C13Q8NGP0 309 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 NPFFR1Q9GZQ6 430 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 RAB26Q9ULW5 256 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 CMYA5Q8N3K9 4069 aa13.84□□□□□ -0.19
SFSWAP-205ENST00000537164 WNK1Q9H4A3 2382 aa13.83□□□□□ -0.19
SFSWAP-205ENST00000537164 LEUTXA8MZ59 168 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 BUB1B-PAK6H3BSN5 160 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 UCHL1P09936 223 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 GZMHP20718 246 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 PRRX1P54821 245 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 PLA1AQ53H76 456 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 UTF1Q5T230 341 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 FAM27D1Q5T7N8 215 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 ZNF497Q6ZNH5 498 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 LRRTM1Q86UE6 522 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 GAPTQ8N292 157 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 OR9G1Q8NH87 305 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 Q96M66 194 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 TMED9Q9BVK6 235 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 IDI2-AS1Q9NZ38 188 aa13.83□□□□□ -0.2
SFSWAP-205ENST00000537164 TMEM30CPA0ZSE6 113 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 OOSP1A8MZH6 123 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 ATP6V1G2O95670 118 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 GLAP06280 429 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 MGMTP16455 207 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 JUNBP17275 347 aaPredicted RBP13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 SRMP19623 302 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 CEACAM3P40198 252 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 MLLT11Q13015 90 aaPredicted RBP13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 RBM48Q5RL73 367 aaKnown RBP13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 C1orf100Q5SVJ3 147 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 LIPKQ5VXJ0 399 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 TMEM104Q8NE00 496 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 MRGPRDQ8TDS7 321 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 UFD1Q92890 307 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 MMP28Q9H239 520 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 TCF7L1Q9HCS4 588 aa13.82□□□□□ -0.2
SFSWAP-205ENST00000537164 FAM172BPA6NC97 362 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 C15orf65H3BRN8 121 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 J3QR06 171 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms