RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 HCCSP53701 268 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 RPL8P62917 257 aaKnown RBP2.83□□□□□ -1.96
CSMD3-210ENST00000534172 HBA1P69905 142 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 FAM3AP98173 230 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 AESQ08117 197 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 RAB40BQ12829 278 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 CLINT1Q14677 625 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ZIC1Q15915 447 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM241Q24JQ0 296 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 PGGHGQ32M88 737 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TIMM50Q3ZCQ8 353 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TCTEX1D4Q5JR98 221 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 LINC00242Q5T6M2 205 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 SMARCD3Q6STE5 483 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 FBXW12Q6X9E4 464 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 SLC30A8Q8IWU4 369 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 LYG1Q8N1E2 194 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM156Q8N614 296 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TPRX1Q8N7U7 411 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ATP6V1C2Q8NEY4 427 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 OR5AK3PQ8NH89 298 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 APH1BQ8WW43 257 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 AURKBQ96GD4 344 aaPredicted RBP2.83□□□□□ -1.96
CSMD3-210ENST00000534172 PKMYT1Q99640 499 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 RAB34Q9BZG1 259 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 WFDC1Q9HC57 220 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 FGF20Q9NP95 211 aaPredicted RBP2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TAS2R13Q9NYV9 303 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF629Q9UEG4 869 aaPredicted RBP2.83□□□□□ -1.96
CSMD3-210ENST00000534172 SLC17A4Q9Y2C5 497 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TPRKBQ9Y3C4 175 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 V9GYH0 126 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 TEP1Q99973 2627 aaKnown RBP2.83□□□□□ -1.96
CSMD3-210ENST00000534172 FAM186AA6NE01 2351 aa2.83□□□□□ -1.96
CSMD3-210ENST00000534172 OTOFQ9HC10 1997 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TRGV8A0A0C4DH27 118 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 A0A0J9YWU9 116 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM213A2RRL7 107 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 OR5H1A6NKK0 313 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 FAAHO00519 579 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 FCN1O00602 326 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 CCL25O15444 150 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 EMC8O43402 210 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 IGHG1P01857 330 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 PMP2P02689 132 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 APODP05090 189 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 OR5AC1P0C628 307 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TDGF1P13385 188 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF35P13682 527 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 UGT2B7P16662 529 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 SDC1P18827 310 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 RAB5AP20339 215 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 CXCR1P25024 350 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 S100GP29377 79 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 SSTR5P35346 364 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 COILP38432 576 aaPredicted RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 XCR1P46094 333 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 LGALS7P47929 136 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 MFAP2P55001 183 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 UBE2KP61086 200 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 MS4A2Q01362 244 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 MXD1Q05195 221 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 HMGN3Q15651 99 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TIGITQ495A1 244 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM244Q5VVB8 128 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 SAXO2Q658L1 398 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 DNAJC24Q6P3W2 148 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 DRAM2Q6UX65 266 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM179Q6ZVK1 233 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 SLC47A2Q86VL8 602 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 H1FOOQ8IZA3 346 aaPredicted RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 SLC39A11Q8N1S5 342 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF664Q8N3J9 261 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 Q8N402 240 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 FTMTQ8N4E7 242 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 OR51F2Q8NH61 342 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 LYPD6BQ8NI32 183 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 RFESDQ8TAC1 157 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 GNPDA2Q8TDQ7 276 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 SSC4DQ8WTU2 575 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM239Q8WW34 195 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 DNAJB3Q8WWF6 145 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 SMARCD1Q96GM5 515 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TP53RKQ96S44 253 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 MOB1AQ9H8S9 216 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF222Q9UK12 451 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 NEU3Q9UQ49 428 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 COL11A1P12107 1806 aaPredicted RBP2.82□□□□□ -1.96
CSMD3-210ENST00000534172 ANKRD36CQ5JPF3 1778 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 IGHV2-70DA0A0C4DH43 119 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 TCRBV9S1A1TA0A576 114 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 M0QXV9 152 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 PHOX2AO14813 284 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 RDH16O75452 317 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 THY1P04216 161 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 BCHEP06276 602 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 OR8U9P0C7N5 309 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 UBBP0CG47 229 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 HSD17B1P14061 328 aa2.82□□□□□ -1.96
CSMD3-210ENST00000534172 GATA1P15976 413 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms