RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 MT-ND4P03905 459 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 GLIPR1P48060 266 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 TMEM30BQ3MIR4 351 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 PLAC9Q5JTB6 97 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 MOB1BQ7L9L4 216 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 C6orf201Q7Z4U5 140 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 FAM185AQ8N0U4 392 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 BPIFB2Q8N4F0 458 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 ARHGAP5-AS1Q96IT6 56 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 SULT4A1Q9BR01 284 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 PECRQ9BY49 303 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 C12orf4Q9NQ89 552 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 KIF25Q9UIL4 384 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 MGAT4AQ9UM21 535 aa12.84□□□□□ -0.35
CTTN-215ENST00000533931 ZNF469Q96JG9 3925 aaPredicted RBP12.83□□□□□ -0.35
CTTN-215ENST00000533931 ACANP16112 2415 aa12.83□□□□□ -0.35
CTTN-215ENST00000533931 MEIKINA0A087WXM9 373 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 ZNF729A6NN14 1252 aaPredicted RBP12.83□□□□□ -0.36
CTTN-215ENST00000533931 C17orf98A8MV24 154 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 XRCC3O43542 346 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 NAPSAO96009 420 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 ZNF728P0DKX0 622 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 GZMHP20718 246 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 PITPNAQ00169 270 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 PNLIPRP3Q17RR3 467 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 MOGAT2Q3SYC2 334 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 METTL11BQ5VVY1 283 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 TCF23Q7RTU1 214 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 OR4M1Q8NGD0 313 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 OR10A7Q8NGE5 316 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 UPRTQ96BW1 309 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 ZNF714Q96N38 554 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 WDFY2Q96P53 400 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 FAAP24Q9BTP7 215 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 TMPRSS13Q9BYE2 586 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 SIRPDQ9H106 197 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 C7orf69Q9H7B7 122 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 METTL8Q9H825 291 aaKnown RBP12.83□□□□□ -0.36
CTTN-215ENST00000533931 MBNL3Q9NUK0 354 aaKnown RBP12.83□□□□□ -0.36
CTTN-215ENST00000533931 COMMD3Q9UBI1 195 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 ADAM30Q9UKF2 790 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 AUP1Q9Y679 476 aa12.83□□□□□ -0.36
CTTN-215ENST00000533931 YLPM1P49750 1951 aaKnown RBP12.82□□□□□ -0.36
CTTN-215ENST00000533931 ORC5O43913 435 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 MELTFP08582 738 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 CGB3P0DN86 165 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 CGB7P0DN87 165 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 MMP9P14780 707 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 MNDAP41218 407 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 DLX6P56179 175 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 ZNF273Q14593 569 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 SRSF7Q16629 238 aaKnown RBP eCLIP12.82□□□□□ -0.36
CTTN-215ENST00000533931 C6orf183Q5T699 404 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 FOXB2Q5VYV0 432 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 METAP1DQ6UB28 335 aaPredicted RBP12.82□□□□□ -0.36
CTTN-215ENST00000533931 MMP27Q9H306 513 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 YAE1D1Q9NRH1 226 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 RABL2AQ9UBK7 228 aaPredicted RBP12.82□□□□□ -0.36
CTTN-215ENST00000533931 RABL2BQ9UNT1 228 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 KCNK7Q9Y2U2 307 aa12.82□□□□□ -0.36
CTTN-215ENST00000533931 F8P00451 2351 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 KBTBD11-OT1A0A1B0GTJ5 212 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 UBE2QL1A1L167 161 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 HNF1AP20823 631 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 PRTN3P24158 256 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 MRPS15P82914 257 aaKnown RBP12.81□□□□□ -0.36
CTTN-215ENST00000533931 HACD4Q5VWC8 232 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 NCR3LG1Q68D85 454 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 FAHD2BQ6P2I3 314 aaPredicted RBP12.81□□□□□ -0.36
CTTN-215ENST00000533931 ZNF880Q6PDB4 577 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 BRICD5Q6PL45 260 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 TRAPPC6BQ86SZ2 158 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 TPRX1Q8N7U7 411 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 MCFD2Q8NI22 146 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 MRPL30Q8TCC3 161 aaKnown RBP12.81□□□□□ -0.36
CTTN-215ENST00000533931 C15orf40Q8WUR7 153 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 FAHD2AQ96GK7 314 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 ONECUT1Q9UBC0 465 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 AK3Q9UIJ7 227 aa12.81□□□□□ -0.36
CTTN-215ENST00000533931 NPIPB11E5RHQ5 1161 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 HPGDSO60760 199 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 CLPXO76031 633 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 TOX4O94842 621 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 EIF4EP06730 217 aaKnown RBP12.8□□□□□ -0.36
CTTN-215ENST00000533931 CD3GP09693 182 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 DTYMKP23919 212 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 CDK2P24941 298 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 BPIFB3P59826 476 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 ERVFRD-1P60508 538 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 ARF6P62330 175 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 ZNF260Q3ZCT1 412 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 CDNFQ49AH0 187 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 TMEM69Q5SWH9 247 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 OR52W1Q6IF63 320 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 BAIAP2L2Q6UXY1 529 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 HEPN1Q6WQI6 88 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 Q6ZS49 121 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 C11orf42Q8N5U0 333 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 Q8N7P7 452 aa12.8□□□□□ -0.36
CTTN-215ENST00000533931 OR13A1Q8NGR1 328 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms