RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CXCL1P09341 107 aa14.27□□□□□ -0.13
CTSB-228ENST00000533455 IGFBP4P22692 258 aa14.27□□□□□ -0.13
CTSB-228ENST00000533455 GLIPR1P48060 266 aa14.27□□□□□ -0.13
CTSB-228ENST00000533455 CARD18P57730 90 aa14.27□□□□□ -0.13
CTSB-228ENST00000533455 TAS2R30P59541 319 aa14.27□□□□□ -0.13
CTSB-228ENST00000533455 IL11RAQ14626 422 aa14.27□□□□□ -0.13
CTSB-228ENST00000533455 HERPUD1Q15011 391 aa14.27□□□□□ -0.13
CTSB-228ENST00000533455 RNPS1Q15287 305 aaKnown RBP14.27□□□□□ -0.13
CTSB-228ENST00000533455 RPS19BP1Q86WX3 136 aaKnown RBP14.27□□□□□ -0.13
CTSB-228ENST00000533455 NIPSNAP3BQ9BS92 247 aa14.27□□□□□ -0.13
CTSB-228ENST00000533455 IGKV1D-13A0A0B4J2D9 117 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 LOC102723971A0A1B0GUV8 181 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 H0Y980 276 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 IGKV1-13P0DP09 117 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 BCL3P20749 454 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 PAX9P55771 341 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 FGF12P61328 243 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 RUNX1Q01196 453 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 COLCA1Q6ZS62 124 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 OR13D1Q8NGV5 346 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 ADGRG7Q96K78 797 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 DOK5Q9P104 306 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 RNF115Q9Y4L5 304 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 VCANP13611 3396 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 TRIOBPQ9H2D6 2365 aa14.26□□□□□ -0.13
CTSB-228ENST00000533455 TNRC6AQ8NDV7 1962 aaKnown RBP14.25□□□□□ -0.13
CTSB-228ENST00000533455 KIR2DS1A0A191URI9 304 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 B4DEV8 164 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 KLF7O75840 302 aaPredicted RBP14.25□□□□□ -0.13
CTSB-228ENST00000533455 DFFBO76075 338 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 SCTP09683 121 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 CTXN2P0C2S0 81 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 KIR2DS4P43632 304 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 NDUFA6P56556 154 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 ERVFRD-1P60508 538 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 ZNF154Q13106 437 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 KIR2DS1Q14954 304 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 ZNF674Q2M3X9 581 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 ZNF343Q6P1L6 599 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 CMTM1Q8IZ96 169 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 BCL2L14Q9BZR8 327 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 TAAR3PQ9P1P4 343 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 ZNF729A6NN14 1252 aaPredicted RBP14.25□□□□□ -0.13
CTSB-228ENST00000533455 CHST1O43916 411 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 CXCL13O43927 109 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 MPV17LQ2QL34 196 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 PYY3Q5JQD4 70 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 OR2B11Q5JQS5 317 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 ZNF468Q5VIY5 522 aaPredicted RBP14.25□□□□□ -0.13
CTSB-228ENST00000533455 YRDCQ86U90 279 aaKnown RBP14.25□□□□□ -0.13
CTSB-228ENST00000533455 AGBL5Q8NDL9 886 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 SAP25Q8TEE9 199 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 CALHM2Q9HA72 323 aa14.25□□□□□ -0.13
CTSB-228ENST00000533455 GAR1Q9NY12 217 aaKnown RBP14.25□□□□□ -0.13
CTSB-228ENST00000533455 SDK1Q7Z5N4 2213 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 SLC25A6P12236 298 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 S100A2P29034 98 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 RPL23AP62750 156 aaKnown RBP14.24□□□□□ -0.13
CTSB-228ENST00000533455 NRN1LQ496H8 165 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 TMEM217Q8N7C4 229 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 OR2V1Q8NHB1 315 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 NAT6Q93015 286 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 SGCZQ96LD1 299 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 FGF23Q9GZV9 251 aaPredicted RBP14.24□□□□□ -0.13
CTSB-228ENST00000533455 CCL28Q9NRJ3 127 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 RYDENQ9NUL5 291 aaKnown RBP14.24□□□□□ -0.13
CTSB-228ENST00000533455 TREM2Q9NZC2 230 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 ATP23Q9Y6H3 246 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 TRBV23-1A0A0A0MS06 115 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 IGKV1-6A0A0C4DH72 117 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 A0A0G2JMM0 328 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 A0A1W2PPB8 328 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 A0A1W2PRS3 328 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 KIR3DP1A8MWS1 328 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 SEC14L6B5MCN3 397 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 KLK3P07288 261 aaPredicted RBP14.24□□□□□ -0.13
CTSB-228ENST00000533455 CEBPGP53567 150 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 HLA-DRB3P79483 266 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 C5orf24Q7Z6I8 188 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 BATF2Q8N1L9 274 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 OPA3Q9H6K4 179 aa14.24□□□□□ -0.13
CTSB-228ENST00000533455 PI4KAP42356 2102 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 TGIF2-C20orf24A0A0A6YYL0 155 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 PIGBOS1A0A0B4J2F0 54 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 C9J4A7 227 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 K7ESF4 209 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 GDF9O60383 454 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 HIST1H2BKO60814 126 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 F10P00742 488 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 HIST1H2BJP06899 126 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 WNT2P09544 360 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 HIST1H2BOP23527 126 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 HIST1H2BBP33778 126 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 HIST1H2BDP58876 126 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 HIST1H2BCP62807 126 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 HIST2H2BEQ16778 126 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.23□□□□□ -0.13
CTSB-228ENST00000533455 STX12Q86Y82 276 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 OR56B2PQ8NGI1 322 aa14.23□□□□□ -0.13
CTSB-228ENST00000533455 OR10D3Q8NH80 312 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms