RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 KIR2DS4P43632 304 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 P2RY1P47900 373 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 ASCL1P50553 236 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 IL13RA2Q14627 380 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 KIR2DS1Q14954 304 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 TMEM88Q6PEY1 159 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 Q6ZRG5 221 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 FAM185AQ8N0U4 392 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 ZNF565Q8N9K5 539 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 SUMF1Q8NBK3 374 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 TMEM178AQ8NBL3 297 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 C11orf1Q9H5F2 150 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 DLL3Q9NYJ7 618 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 PURGQ9UJV8 347 aaKnown RBP13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 CARHSP1Q9Y2V2 147 aaKnown RBP13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 POMT1Q9Y6A1 747 aa13.06□□□□□ -0.32
CACNA1E-208ENST00000533229 TNFSF12O43508 249 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 CDS2O95674 445 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 RND3P61587 244 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 ALKBH6Q3KRA9 238 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 GPR157Q5UAW9 335 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 OR10Z1Q8NGY1 313 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 NRIP2Q9BQI9 281 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 OR2J1Q9GZK6 312 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 PLK3Q9H4B4 646 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 PARP11Q9NR21 331 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 LAMA5O15230 3695 aa13.05□□□□□ -0.32
CACNA1E-208ENST00000533229 IGHV3-64DA0A0J9YX35 117 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 OR8U9P0C7N5 309 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 IGHV1-2P23083 117 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 FHITP49789 147 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 SOX8P57073 446 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 POLR2GP62487 172 aaKnown RBP eCLIP13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 ZNF695Q8IW36 515 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 OR8U1Q8NH10 309 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 LYPD6BQ8NI32 183 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 NANOS1Q8WY41 292 aaKnown RBP13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 GMPPAQ96IJ6 420 aaPredicted RBP13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 SEC11CQ9BY50 192 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 SH3BGRL3Q9H299 93 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 TTC28Q96AY4 2481 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 TRAV39A0A0B4J263 110 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 RNASEK-C17orf49H0YIS7 233 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 SMPD2O60906 423 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 LYZL6O75951 148 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 CD5P06127 495 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 CCL11P51671 97 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 CXorf66Q5JRM2 361 aaPredicted RBP13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 Q6P435 159 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 LINC00596Q86U02 117 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 FDCSPQ8NFU4 85 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 GTF3AQ92664 365 aaKnown RBP13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 PKIBQ9C010 78 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 SAV1Q9H4B6 383 aaPredicted RBP13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 SPACA1Q9HBV2 294 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 CACNA1HO95180 2353 aa13.04□□□□□ -0.32
CACNA1E-208ENST00000533229 FAM24AA6NFZ4 105 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 ADAM20O43506 726 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 ZNF44P15621 663 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 WT1P19544 449 aaPredicted RBP13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 NPBWR1P48145 328 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 IDH3GP51553 393 aaPredicted RBP13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 F2RL1P55085 397 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 TBC1D28Q2M2D7 210 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 FAM76BQ5HYJ3 339 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 ZNF324BQ6AW86 544 aaPredicted RBP13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 ZNF880Q6PDB4 577 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 CBLN2Q8IUK8 224 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 BOD1Q96IK1 185 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 GINS3Q9BRX5 216 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 ZFP57Q9NU63 452 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 ZNF175Q9Y473 711 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 TRBV6-6A0A0A6YYG2 114 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 CDRT15L2A8MXV6 281 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 FAM157AC9JC47 383 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 J3QT63 122 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 PGLYRP1O75594 196 aaPredicted RBP13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 C1QL1O75973 258 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 CTXN2P0C2S0 81 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 SPP1P10451 314 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 SELEP16581 610 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 UCP1P25874 307 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 CD80P33681 288 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 SRPXP78539 464 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 EWSR1Q01844 656 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 GNMTQ14749 295 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 NMSQ5H8A3 153 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 P4HA3Q7Z4N8 544 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 LINC00518Q8N0U6 118 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 KIRREL1Q96J84 757 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 MAGT1Q9H0U3 335 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 RIMS4Q9H426 269 aaPredicted RBP13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 CLCF1Q9UBD9 225 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 PRELID3BQ9Y3B1 194 aa13.03□□□□□ -0.32
CACNA1E-208ENST00000533229 DEGS1O15121 323 aa13.02□□□□□ -0.33
CACNA1E-208ENST00000533229 SEC11BP0C7V7 166 aa13.02□□□□□ -0.33
CACNA1E-208ENST00000533229 DANCRP0C864 163 aa13.02□□□□□ -0.33
CACNA1E-208ENST00000533229 NKX2-1P43699 371 aaPredicted RBP13.02□□□□□ -0.33
CACNA1E-208ENST00000533229 PPP1CBP62140 327 aa13.02□□□□□ -0.33
CACNA1E-208ENST00000533229 HFEQ30201 348 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms