RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 NKX2-1P43699 371 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-214ENST00000530886 ASCL1P50553 236 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 PPP1CBP62140 327 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 RUNX1Q01196 453 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 RBPJQ06330 500 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 HYAL1Q12794 435 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 SLC46A2Q9BY10 475 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 NKX2-4Q9H2Z4 354 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 RPRMQ9NS64 109 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 DAPP1Q9UN19 280 aa7.03□□□□□ -1.28
CSDE1-214ENST00000530886 SERINC4A6NH21 518 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 CEBPZOSA8MTT3 80 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF814B7Z6K7 855 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 DIRC3C9JPN6 131 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 TMPRSS2O15393 492 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF728P0DKX0 622 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 SELPP16109 830 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 FNDC7Q5VTL7 733 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 MARCH3Q86UD3 253 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 LRP11Q86VZ4 500 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 COMMD2Q86X83 199 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 TMEM25Q86YD3 366 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 TMEM52Q8NDY8 209 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 OR4F17Q8NGA8 305 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 PLPPR1Q8TBJ4 325 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 PINX1Q96BK5 328 aaKnown RBP7.02□□□□□ -1.29
CSDE1-214ENST00000530886 STARD4Q96DR4 205 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 GMPPAQ96IJ6 420 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-214ENST00000530886 SPACA7Q96KW9 195 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 OR4F4Q96R69 305 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF586Q9NXT0 402 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 A0A1B0GUS0 222 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 GYPAP02724 150 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 GPX1P07203 203 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 GPR1P46091 355 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 ID3Q02535 119 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 RNPS1Q15287 305 aaKnown RBP7.02□□□□□ -1.29
CSDE1-214ENST00000530886 RNF144BQ7Z419 303 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 NIT1Q86X76 327 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-214ENST00000530886 PARLQ9H300 379 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 RYDENQ9NUL5 291 aaKnown RBP7.02□□□□□ -1.29
CSDE1-214ENST00000530886 ANXA10Q9UJ72 324 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 FREM3P0C091 2139 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF320A2RRD8 509 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF737O75373 536 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 SERF1AO75920 110 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 HLA-DQA2P01906 255 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 S100A7P31151 101 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 RPL27P61353 136 aaKnown RBP7.02□□□□□ -1.29
CSDE1-214ENST00000530886 ZP4Q12836 540 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 RAET1LQ5VY80 246 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 DGAT2L6Q6ZPD8 337 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 RNF44Q7L0R7 432 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 MCEMP1Q8IX19 187 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 RNF133Q8WVZ7 376 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 APOOQ9BUR5 198 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 MOB1AQ9H8S9 216 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 CCL26Q9Y258 94 aa7.02□□□□□ -1.29
CSDE1-214ENST00000530886 EXPH5Q8NEV8 1989 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 IGKV1D-8A0A087WSZ0 117 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 CCL15-CCL14A0A0B4J2E2 113 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 TNFRSF10CO14798 259 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 GABRA2P47869 451 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 TM4SF4P48230 202 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 CCL15Q16663 113 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 ABCA11PQ4W5N1 156 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 C10orf53Q8N6V4 93 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 CCDC71LQ8N9Z2 235 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 OR5P3Q8WZ94 311 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 REEP6Q96HR9 211 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 LIME1Q9H400 295 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 NECAP2Q9NVZ3 263 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 A0A0U1RQK1 487 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 G3V4G9 280 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 NPIPB7O75200 414 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF253O75346 499 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 GPR75O95800 540 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 CSTAP01040 98 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 NRASP01111 189 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 KRASP01116 189 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 PSG1P11464 419 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 CD33P20138 364 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 MDH2P40926 338 aaKnown RBP7.01□□□□□ -1.29
CSDE1-214ENST00000530886 OR3A4PP47883 348 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 SLC6A8P48029 635 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 CDC34P49427 236 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-214ENST00000530886 RPS15AP62244 130 aaKnown RBP7.01□□□□□ -1.29
CSDE1-214ENST00000530886 RTP5Q14D33 572 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 VAMP3Q15836 100 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 SP6Q3SY56 376 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 ADAMTSL4Q6UY14 1074 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 CALHM1Q8IU99 346 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 OR4N5Q8IXE1 308 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 SAXO1Q8IYX7 474 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 OR52R1Q8NGF1 315 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 WFDC12Q8WWY7 111 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 SPSB1Q96BD6 273 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 SIGLEC12Q96PQ1 595 aa7.01□□□□□ -1.29
CSDE1-214ENST00000530886 SGIP1Q9BQI5 828 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms