RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 ERP29P30040 261 aaKnown RBP7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 KIR2DS4P43632 304 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 OR3A3P47888 321 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TAS2R19P59542 299 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 DEFA1P59665 94 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 DEFA3P59666 94 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SEC61A1P61619 476 aaKnown RBP7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 GNB2P62879 340 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 RPL31P62899 125 aaKnown RBP7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 IFITM3Q01628 133 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 KIR2DS1Q14954 304 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ESCO2Q56NI9 601 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 C6orf183Q5T699 404 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 STEAP3Q658P3 488 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 OR52W1Q6IF63 320 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MOB1BQ7L9L4 216 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 LYSMD2Q8IV50 215 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 FAM185AQ8N0U4 392 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 OR5H2Q8NGV7 314 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CLDND2Q8NHS1 167 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MRGPRDQ8TDS7 321 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TRIM63Q969Q1 353 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 OR6C3Q9NZP0 311 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ANXA10Q9UJ72 324 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MGAT4AQ9UM21 535 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SPTBN1Q01082 2364 aaKnown RBP7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 IGKV1D-8A0A087WSZ0 117 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TRGV10A0A0A0MS01 117 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ANKRD20A5PA0PJZ0 165 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 VWC2LB2RUY7 222 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 M0QYG6 137 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 GPR37O15354 613 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 FABP7O15540 132 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 PHF1O43189 567 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 IGHV2-5P01817 119 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 IFNA6P05013 189 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 AKAIN1P0CW23 69 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SLC25A16P16260 332 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 NAT1P18440 290 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 GZMHP20718 246 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 FAUP35544 74 aaKnown RBP7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 GLP1RP43220 463 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 NPY4RP50391 375 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TAS2R46P59540 309 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MEF2CQ06413 473 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 KLF9Q13886 244 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SRSF7Q16629 238 aaKnown RBP eCLIP7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ACTBL2Q562R1 376 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 Q5PR19 223 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CD276Q5ZPR3 534 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 WDR25Q64LD2 544 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 STEAP1BQ6NZ63 245 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MZT2BQ6NZ67 158 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ZNF880Q6PDB4 577 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TRAT1Q6PIZ9 186 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ZNF841Q6ZN19 808 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 BTN2A1Q7KYR7 527 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 C5orf24Q7Z6I8 188 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 GAPTQ8N292 157 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 PRR18Q8N4B5 295 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 POC5Q8NA72 575 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 OR5AP2Q8NGF4 316 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 OR13A1Q8NGR1 328 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 RFESDQ8TAC1 157 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 UBALD1Q8TB05 177 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 IL1F10Q8WWZ1 152 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SNAPC3Q92966 411 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ARL11Q969Q4 196 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 RAB39BQ96DA2 213 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SSBP3Q9BWW4 388 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 NCOR1P1Q9H4R4 102 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TAF9BQ9HBM6 251 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 HRASLSQ9HDD0 168 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 PALMDQ9NP74 551 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 C19orf12Q9NSK7 152 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MCUBQ9NWR8 336 aa7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ZNF107Q9UII5 783 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 RAI1Q7Z5J4 1906 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 LOC105371242A0A075B767 164 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TRBV23-1A0A0A0MS06 115 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 IGHV4-61A0A0C4DH41 118 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 DISC1C4P0D8 188 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 C12orf77C9JDV5 145 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 F5H0A9 414 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SDCBPO00560 298 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 BET1O15155 118 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 PLA2G10O15496 165 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SPINT2O43291 252 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 FCN3O75636 299 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 HBZP02008 142 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SCTP09683 121 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CTXN2P0C2S0 81 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 USF1P22415 310 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 IL2RGP31785 369 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 HRH1P35367 487 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 RFX2P48378 723 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 LMO4P61968 165 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TSPAN5P62079 268 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 HLA-DRB3P79483 266 aa7.04□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 PAX5Q02548 391 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms