RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 RFESDQ8TAC1 157 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 CNIH3Q8TBE1 160 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 TRUB1Q8WWH5 349 aaKnown RBP11.73□□□□□ -0.53
CAPN1-219ENST00000530495 GON7Q9BXV9 100 aa11.73□□□□□ -0.53
CAPN1-219ENST00000530495 AP4M1O00189 453 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 HSPB6O14558 160 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 RPLP1P05386 114 aaKnown RBP11.72□□□□□ -0.53
CAPN1-219ENST00000530495 CDX1P47902 265 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-219ENST00000530495 GNG10P50151 68 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 LUMP51884 338 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-219ENST00000530495 RAB25P57735 213 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 ZNF816Q0VGE8 651 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-219ENST00000530495 SLC25A30Q5SVS4 291 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 RSBN1Q5VWQ0 802 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-219ENST00000530495 TGIF2LXQ8IUE1 241 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 PARP16Q8N5Y8 322 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 OR5M8Q8NGP6 311 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 OR8U1Q8NH10 309 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 PELI1Q96FA3 418 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 EAF1Q96JC9 268 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-219ENST00000530495 NR1H4Q96RI1 486 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-219ENST00000530495 ABCG5Q9H222 651 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 RIBC2Q9H4K1 309 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 SCOCQ9UIL1 159 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 AP4S1Q9Y587 144 aa11.72□□□□□ -0.53
CAPN1-219ENST00000530495 IGHV1-3A0A0C4DH29 117 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 C3orf84H3BNL1 204 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 J3QLW9 94 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 SULT1B1O43704 296 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 GAPDHP04406 335 aaKnown RBP11.71□□□□□ -0.53
CAPN1-219ENST00000530495 HCKP08631 526 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 RPSAP08865 295 aaKnown RBP11.71□□□□□ -0.53
CAPN1-219ENST00000530495 ZNF19P17023 458 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 GPR12P47775 334 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 KCNJ3P48549 501 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 FOXE3Q13461 319 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 ALKBH1Q13686 389 aaKnown RBP11.71□□□□□ -0.53
CAPN1-219ENST00000530495 LTC4SQ16873 150 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 C9orf66Q5T8R8 295 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 ZNF691Q5VV52 312 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 Q8N6K4 173 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 RNF152Q8N8N0 203 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 Q8NFD4 153 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 PXT1Q8NFP0 134 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 OR10X1Q8NGY0 326 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 PLPPR1Q8TBJ4 325 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 MRGPRDQ8TDS7 321 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 RNFT2Q96EX2 444 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 PRR25Q96S07 402 aa11.71□□□□□ -0.53
CAPN1-219ENST00000530495 LIN7CQ9NUP9 197 aaKnown RBP11.71□□□□□ -0.53
CAPN1-219ENST00000530495 A0A1W2PPE3 182 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 NCBP2LA6PVI3 153 aaKnown RBP11.7□□□□□ -0.54
CAPN1-219ENST00000530495 CCRL2O00421 344 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 HSD17B6O14756 317 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 MPZL2O60487 215 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 GZMHP20718 246 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 SSTR5P35346 364 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 GPR50Q13585 617 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 IL13RA2Q14627 380 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 CXorf66Q5JRM2 361 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-219ENST00000530495 LCNL1Q6ZST4 164 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 MOB3BQ86TA1 216 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 IZUMO1Q8IYV9 350 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 ACBD7Q8N6N7 88 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 Q8N9W7 124 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 OR2T10Q8NGZ9 312 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 C4orf36Q96KX1 117 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 PLSCR3Q9NRY6 295 aa11.7□□□□□ -0.54
CAPN1-219ENST00000530495 TRAV39A0A0B4J263 110 aa11.69□□□□□ -0.54
CAPN1-219ENST00000530495 ELANEP08246 267 aa11.69□□□□□ -0.54
CAPN1-219ENST00000530495 FCGR1AP12314 374 aa11.69□□□□□ -0.54
CAPN1-219ENST00000530495 ECI1P42126 302 aa11.69□□□□□ -0.54
CAPN1-219ENST00000530495 DEFB136Q30KP8 78 aa11.69□□□□□ -0.54
CAPN1-219ENST00000530495 MEDAGQ5VYS4 303 aa11.69□□□□□ -0.54
CAPN1-219ENST00000530495 ASCL4Q6XD76 172 aa11.69□□□□□ -0.54
CAPN1-219ENST00000530495 C8orf31Q8N9H6 132 aa11.69□□□□□ -0.54
CAPN1-219ENST00000530495 OAZ3Q9UMX2 235 aa11.69□□□□□ -0.54
CAPN1-219ENST00000530495 EXOGQ9Y2C4 368 aaKnown RBP11.69□□□□□ -0.54
CAPN1-219ENST00000530495 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 SEC14L6B5MCN3 397 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 CD1BP29016 333 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 REG1BP48304 166 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 SNRPGP62308 76 aaKnown RBP11.68□□□□□ -0.54
CAPN1-219ENST00000530495 CFHR3Q02985 330 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 ZSCAN26Q16670 478 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 PIGYQ3MUY2 71 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 KLHL22Q53GT1 634 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 ZNF529Q6P280 563 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 LINC00311Q8N616 119 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 TMEM104Q8NE00 496 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 OR52M1Q8NGK5 317 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 ST6GALNAC6Q969X2 333 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 CPNE2Q96FN4 548 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-219ENST00000530495 CENPNQ96H22 339 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-219ENST00000530495 MYCBPQ99417 103 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-219ENST00000530495 ASCL2Q99929 193 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 DPCDQ9BVM2 203 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-219ENST00000530495 IFT22Q9H7X7 185 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 FAM118AQ9NWS6 357 aa11.68□□□□□ -0.54
CAPN1-219ENST00000530495 IMPAD1Q9NX62 359 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms