RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 SURF2Q15527 256 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-221ENST00000529873 OR1B1Q8NGR6 318 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 PCOLCE2Q9UKZ9 415 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 SHANK3Q9BYB0 1731 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 COL11A2P13942 1736 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-221ENST00000529873 RHBDL1O75783 438 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 MPC2O95563 127 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 PATE4P0C8F1 98 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 DDTP30046 118 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 ZNF721Q8TF20 911 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 APOBEC4Q8WW27 367 aaKnown RBP7.48□□□□□ -1.21
CTNND1-221ENST00000529873 FAM131CQ96AQ9 280 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 ZNF665Q9H7R5 613 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 IL36GQ9NZH8 169 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 OPN1MWP04001 364 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 OPN1MW2P0DN77 364 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 OPN1MW3P0DN78 364 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 SLC6A1P30531 599 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 KIR2DL1P43626 348 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-221ENST00000529873 PSG6Q00889 435 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 OR4D11Q8NGI4 311 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 GPA33Q99795 319 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 Q9N2K0 584 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 ZNF71Q9NQZ8 489 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-221ENST00000529873 COA4Q9NYJ1 87 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 RNF7Q9UBF6 113 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 WSB1Q9Y6I7 421 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 LIFP15018 202 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 TFF2Q03403 129 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 C8orf82Q6P1X6 216 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-221ENST00000529873 SPNS3Q6ZMD2 512 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 OR52L2PQ8NGH6 319 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 SLC25A40Q8TBP6 338 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 SP7Q8TDD2 431 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-221ENST00000529873 RAB37Q96AX2 223 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 GMPPAQ96IJ6 420 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-221ENST00000529873 ZNF426Q9BUY5 554 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 LPAR3Q9UBY5 353 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 KCNMB2Q9Y691 235 aa7.48□□□□□ -1.21
CTNND1-221ENST00000529873 OR4A8P0C604 315 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 SELENOPP49908 381 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 PLP1P60201 277 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 SMAGPQ0VAQ4 97 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 PNRC1Q12796 327 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-221ENST00000529873 SLC25A30Q5SVS4 291 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 C1orf185Q5T7R7 199 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 OR4A47Q6IF82 309 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 LIAT1Q6ZQX7 453 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 SMRP1Q8NCR6 262 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 OR1L1Q8NH94 360 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 VSTM2AQ8TAG5 236 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 ZNF107Q9UII5 783 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-221ENST00000529873 MFSD2BA6NFX1 497 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 LGALS7P47929 136 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 OR2C3Q8N628 320 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 GVQW1Q8N7I0 195 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 RFESDQ8TAC1 157 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 RASL11BQ9BPW5 248 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 COL25A1Q9BXS0 654 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-221ENST00000529873 SLC35B3Q9H1N7 401 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 HSPB8Q9UJY1 196 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 WNK3Q9BYP7 1800 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 HMSDA8MTL9 139 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 HYAL3O43820 417 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-221ENST00000529873 COMPP49747 757 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-221ENST00000529873 ZXDAP98168 799 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 MOGAT3Q86VF5 341 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 SFTPA2Q8IWL1 248 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 C9orf40Q8IXQ3 194 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 GHITMQ9H3K2 345 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 SLC52A3Q9NQ40 469 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 TMEM38BQ9NVV0 291 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 PITPNC1Q9UKF7 332 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 TCRBV16S1A1N1A0A5B0 115 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 HIST3H3Q16695 136 aa7.47□□□□□ -1.21
CTNND1-221ENST00000529873 CORTO00230 105 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 TMPRSS2O15393 492 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 CCL3P10147 92 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 CTSSP25774 331 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 HLA-DRB3P79483 266 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 MRPS11P82912 194 aaKnown RBP7.46□□□□□ -1.21
CTNND1-221ENST00000529873 CFHR5Q9BXR6 569 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 ZNF430Q9H8G1 570 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-221ENST00000529873 TMEM167BQ9NRX6 74 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 NTMQ9P121 344 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 NAGKQ9UJ70 344 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 XIRP1Q702N8 1843 aaKnown RBP7.46□□□□□ -1.21
CTNND1-221ENST00000529873 GEMIN2O14893 280 aaKnown RBP7.46□□□□□ -1.21
CTNND1-221ENST00000529873 SPINT1O43278 529 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 ACP1P24666 158 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 EMP1P54849 157 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 GGTLC2Q14390 218 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 INO80CQ6PI98 192 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-221ENST00000529873 PDPNQ86YL7 162 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 DOLPP1Q86YN1 238 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 NFAM1Q8NET5 270 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-221ENST00000529873 OR4C12Q96R67 309 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 HSD17B10Q99714 261 aaKnown RBP7.46□□□□□ -1.21
CTNND1-221ENST00000529873 NRTNQ99748 197 aa7.46□□□□□ -1.21
CTNND1-221ENST00000529873 SLC25A33Q9BSK2 321 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms