RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 RNF157Q96PX1 679 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 TBL1YQ9BQ87 522 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 METTL17Q9H7H0 456 aaPredicted RBP2.66□□□□□ -1.98
C11orf88-204ENST00000529661 NRCAMQ92823 1304 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 NAV1Q8NEY1 1877 aa2.65□□□□□ -1.98
C11orf88-204ENST00000529661 IGHV6-1A0A0B4J1U7 121 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 CCL15-CCL14A0A0B4J2E2 113 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 TMEM150BA6NC51 233 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 M0R1X1 148 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 PLIN3O60664 434 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 HLA-DRAP01903 254 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 HLA-DQB1P01920 261 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF806P0C7X5 589 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 CD99P14209 185 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 AKR1C4P17516 323 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 IL1RNP18510 177 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 TAC1P20366 129 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 RPS12P25398 132 aaKnown RBP2.65□□□□□ -1.99
C11orf88-204ENST00000529661 SLC18A1P54219 525 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 POLR2GP62487 172 aaKnown RBP eCLIP2.65□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF816Q0VGE8 651 aaPredicted RBP2.65□□□□□ -1.99
C11orf88-204ENST00000529661 CCL15Q16663 113 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 ATP6AP1LQ52LC2 224 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 TNFAIP8L2Q6P589 184 aaPredicted RBP2.65□□□□□ -1.99
C11orf88-204ENST00000529661 SPNS3Q6ZMD2 512 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 SHISA6Q6ZSJ9 500 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 FAM231DQ6ZW35 169 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 OR4P4Q8NGL7 312 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 OR4C13Q8NGP0 309 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF420Q8TAQ5 688 aaPredicted RBP2.65□□□□□ -1.99
C11orf88-204ENST00000529661 L3HYPDHQ96EM0 354 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 SNF8Q96H20 258 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 PPP1R36Q96LQ0 422 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 SPACA5Q96QH8 159 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 DOK1Q99704 481 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 NUDT9Q9BW91 350 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 MS4A6AQ9H2W1 248 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 OR51B6Q9H340 312 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 MAP1LC3AQ9H492 121 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 PLEKHF2Q9H8W4 249 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 ENOPH1Q9UHY7 261 aa2.65□□□□□ -1.99
C11orf88-204ENST00000529661 EIF3AQ14152 1382 aaKnown RBP2.64□□□□□ -1.99
C11orf88-204ENST00000529661 TRAV8-2A0A0B4J237 113 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 CENPVL3A0A0U1RRI6 287 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 PGPA6NDG6 321 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 FAM183AA6NL82 134 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 KPNA3O00505 521 aaPredicted RBP2.64□□□□□ -1.99
C11orf88-204ENST00000529661 CCDC22O60826 627 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 PDCD6O75340 191 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 KRT75O95678 551 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 MYL12AP19105 171 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 NPY1RP25929 384 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 OR4D2P58180 307 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 RANP62826 216 aaKnown RBP2.64□□□□□ -1.99
C11orf88-204ENST00000529661 PMVKQ15126 192 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 GUK1Q16774 197 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 SPIN3Q5JUX0 258 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 FAM222AQ5U5X8 452 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 DGAT2L6Q6ZPD8 337 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 Q6ZSR6 202 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 MUC15Q8N387 334 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 ENKURQ8TC29 256 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 CCL17Q92583 94 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 TMEM159Q96B96 161 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 PPCDCQ96CD2 204 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 SMIM8Q96KF7 97 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 CHCHD7Q9BUK0 85 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 TLNRD1Q9H1K6 362 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 OR51E2Q9H255 320 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 CENPHQ9H3R5 247 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 VSIRQ9H7M9 311 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.64□□□□□ -1.99
C11orf88-204ENST00000529661 STOML2Q9UJZ1 356 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 FARSAQ9Y285 508 aaKnown RBP2.64□□□□□ -1.99
C11orf88-204ENST00000529661 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.64□□□□□ -1.99
C11orf88-204ENST00000529661 ZFYVE9O95405 1425 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 SETD1AO15047 1707 aaKnown RBP2.64□□□□□ -1.99
C11orf88-204ENST00000529661 CAMSAP1Q5T5Y3 1602 aa2.64□□□□□ -1.99
C11orf88-204ENST00000529661 YLPM1P49750 1951 aaKnown RBP2.63□□□□□ -1.99
C11orf88-204ENST00000529661 FLT4P35916 1363 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 METTL15A6NJ78 407 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 OR5K4A6NMS3 321 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 FADS1O60427 444 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 RPL12P30050 165 aaKnown RBP2.63□□□□□ -1.99
C11orf88-204ENST00000529661 PYCR1P32322 319 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 PRSS3P35030 304 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 RCVRNP35243 200 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 HSPA13P48723 471 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 RAB14P61106 215 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 FMODQ06828 376 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 OR2F1Q13607 317 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 MOBPQ13875 183 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF235Q14590 738 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 HIST3H3Q16695 136 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 Q499Y3 187 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 CLLU1OSQ5K130 101 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 NT5DC3Q86UY8 548 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 OSR2Q8N2R0 312 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 OR9A2Q8NGT5 310 aa2.63□□□□□ -1.99
C11orf88-204ENST00000529661 CLDN23Q96B33 292 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms