RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 GGNBP1Q5YKI7 109 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 ZNF497Q6ZNH5 498 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 FAM90A1Q86YD7 464 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 LRRC20Q8TCA0 184 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 ST8SIA2Q92186 375 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 S100PBPQ96BU1 408 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 C18orf12Q96KH6 178 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 OR10C1Q96KK4 312 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 CNTNAP3BQ96NU0 1288 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 AQP10Q96PS8 301 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 CNTNAP3Q9BZ76 1288 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 TAAR3PQ9P1P4 343 aa12.52□□□□□ -0.41
ECHDC1-220ENST00000528402 C3orf85A0A1B0GTC6 90 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 LEUTXA8MZ59 168 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 H0YL77 283 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 BET1O15155 118 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 PTBP3O95758 552 aaKnown RBP12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 HAND1O96004 215 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 IGHV3-13P01766 116 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 RRASP10301 218 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 CFHR2P36980 270 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 CD200P41217 278 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 NHLH1Q02575 133 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 PHLDA2Q53GA4 152 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 PCSK4Q6UW60 755 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 C11orf53Q8IXP5 236 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 H1FOOQ8IZA3 346 aaPredicted RBP12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 STOML3Q8TAV4 291 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 IL22RA2Q969J5 263 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 MSI2Q96DH6 328 aaKnown RBP12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 AKR1E2Q96JD6 320 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 SLC5A7Q9GZV3 580 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 MBNL3Q9NUK0 354 aaKnown RBP12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 KCNIP1Q9NZI2 227 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 GSKIPQ9P0R6 139 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 ZNF835Q9Y2P0 537 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 OR2W1Q9Y3N9 320 aa12.51□□□□□ -0.41
ECHDC1-220ENST00000528402 M0R1B8 84 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 GFRA3O60609 400 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 TMPRSS3P57727 454 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 RAB32Q13637 225 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 SMIM21Q3B7S5 101 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 SLC35E4Q6ICL7 350 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 ACP7Q6ZNF0 438 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 DOLPP1Q86YN1 238 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 PDZD9Q8IXQ8 264 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 GLYATL2Q8WU03 294 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 TMEM56Q96MV1 263 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 CITED4Q96RK1 184 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 SPIN2AQ99865 258 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 SPIN2BQ9BPZ2 258 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 TMEM222Q9H0R3 208 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 PLEKHA2Q9HB19 425 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 TMEM56-RWDD3S4R434 201 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 SHANK1Q9Y566 2161 aa12.5□□□□□ -0.41
ECHDC1-220ENST00000528402 CEP250Q9BV73 2442 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 TMEM30CPA0ZSE6 113 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 A6NLC8 198 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 F5H0A9 414 aaPredicted RBP12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 H0YIZ8 118 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 HSPB6O14558 160 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 PHF1O43189 567 aaPredicted RBP12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 CDS2O95674 445 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 TPT1P13693 172 aaKnown RBP12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 ZNF83P51522 516 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 PAX5Q02548 391 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 ATXN7L3Q14CW9 347 aaPredicted RBP12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 HERPUD1Q15011 391 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 GFRALQ6UXV0 394 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 Q6ZR03 302 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 BVESQ8NE79 360 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 SECTM1Q8WVN6 248 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 ABHD14BQ96IU4 210 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 ZNF471Q9BX82 626 aaPredicted RBP12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 SHARPINQ9H0F6 387 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 PFDN2Q9UHV9 154 aa12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 UBE2J1Q9Y385 318 aaPredicted RBP12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 PTPRZ1P23471 2315 aaPredicted RBP12.49□□□□□ -0.41
ECHDC1-220ENST00000528402 SVILO95425 2214 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 IGKV1-6A0A0C4DH72 117 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 SIRPB1O00241 398 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 SPINK2P20155 84 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 KLF3P57682 345 aaPredicted RBP12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 NKX6-1P78426 367 aaPredicted RBP12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 HMGN3Q15651 99 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 TRAT1Q6PIZ9 186 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 ALKAL2Q6UX46 152 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 WDR82Q6UXN9 313 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 C20orf204Q6ZNR8 217 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 TBC1D26Q86UD7 250 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 COMMD7Q86VX2 200 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 CISD2Q8N5K1 135 aaKnown RBP12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 PPP1R35Q8TAP8 253 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 MRPL24Q96A35 216 aaKnown RBP12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 PRR13Q9NZ81 148 aa12.48□□□□□ -0.41
ECHDC1-220ENST00000528402 IGLV3-9A0A075B6K5 115 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 MPTX1A8MV57 137 aa12.47□□□□□ -0.41
ECHDC1-220ENST00000528402 E5RGE8 158 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms